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Report for CCDS4660.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
4660.1 Public Homo sapiens 6 OR2H1 24 110 108 CCDS HistoryNCBI Gene:26716Re-query CCDS DB by CCDS ID:4660.1See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 4660.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000377132.1 ENSP00000366336.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000377132.1Link to Ensembl Protein Viewer:ENSP00000366336.1Re-query CCDS DB by Nucleotide ID:ENST00000377132Re-query CCDS DB by Protein ID:ENSP00000366336
Original member Current member EBI ENST00000377133.6 ENSP00000366337.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000377133.6Link to Ensembl Protein Viewer:ENSP00000366337.1Re-query CCDS DB by Nucleotide ID:ENST00000377133Re-query CCDS DB by Protein ID:ENSP00000366337
Original member Current member EBI ENST00000377136.5 ENSP00000366340.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000377136.5Link to Ensembl Protein Viewer:ENSP00000366340.1Re-query CCDS DB by Nucleotide ID:ENST00000377136Re-query CCDS DB by Protein ID:ENSP00000366340
Original member Current member EBI ENST00000396792.2 ENSP00000380010.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000396792.2Link to Ensembl Protein Viewer:ENSP00000380010.2Re-query CCDS DB by Nucleotide ID:ENST00000396792Re-query CCDS DB by Protein ID:ENSP00000380010
Original member Current member NCBI NM_001318014.2 NP_001304943.1 Accepted alive Link to Nucleotide Sequence:NM_001318014.2Link to Protein Sequence:NP_001304943.1Re-query CCDS DB by Nucleotide ID:NM_001318014Re-query CCDS DB by Protein ID:NP_001304943Link to BLAST:NP_001304943.1
Original member Current member NCBI NM_001318022.2 NP_001304951.1 Accepted alive Link to Nucleotide Sequence:NM_001318022.2Link to Protein Sequence:NP_001304951.1Re-query CCDS DB by Nucleotide ID:NM_001318022Re-query CCDS DB by Protein ID:NP_001304951Link to BLAST:NP_001304951.1
Original member Current member NCBI NM_030883.5 NP_112145.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_030883.5Link to Protein Sequence:NP_112145.1Re-query CCDS DB by Nucleotide ID:NM_030883Re-query CCDS DB by Protein ID:NP_112145Link to BLAST:NP_112145.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001304943.1 316 Q9GZK4 316 100% 0 0
NP_001304951.1 316 Q9GZK4 316 100% 0 0
NP_112145.1 316 Q9GZK4 316 100% 0 0

Chromosomal Locations for CCDS 4660.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 6 (NC_000006.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 29461770 29462720 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (951 nt):
ATGGTTAACCAAAGCTCCCCCATGGGCTTCCTCCTTCTGGGCTTCTCTGAACACCCAGCACTGGAAAGGA
CTCTCTTTGTGGTTGTCTTCACTTCCTACCTCTTGACCCTGGTGGGCAACACACTCATCATCCTGCTGTC
TGTACTGTACCCCAGGCTCCACTCTCCAATGTACTTTTTCCTCTCTGACCTCTCCTTCTTGGACCTCTGC
TTTACCACAAGTTGTGTCCCCCAGATGCTGGTCAACCTCTGGGGCCCAAAGAAGACCATCAGCTTCCTGG
GATGCTCTGTCCAGCTCTTCATCTTCCTGTCCCTGGGGACCACTGAGTGCATCCTCCTGACAGTGATGGC
CTTTGACCGATACGTGGCTGTCTGCCAGCCCCTCCACTATGCCACCATCATCCACCCCCGCCTGTGCTGG
CAGCTGGCATCTGTGGCCTGGGTTATGAGTCTGGTTCAATCGATAGTCCAGACACCATCCACCCTCCACT
TGCCCTTCTGTCCCCACCAGCAGATAGATGACTTTTTATGTGAGGTCCCATCTCTGATTCGACTCTCCTG
TGGAGATACCTCCTACAATGAAATCCAGTTGGCTGTGTCCAGTGTCATCTTCGTGGTTGTGCCTCTCAGC
CTCATCCTTGCCTCTTATGGAGCCACTGCCCAGGCAGTGCTGAGGATTAACTCTGCCACAGCATGGAGAA
AGGCCTTTGGGACCTGCTCCTCCCATCTCACTGTGGTCACCCTCTTCTACAGCTCAGTCATTGCTGTCTA
CCTCCAGCCCAAAAATCCGTATGCCCAAGGGAGGGGCAAGTTCTTTGGTCTCTTCTATGCAGTGGGCACT
CCTTCACTTAACCCTCTCGTATACACCCTGAGGAACAAGGAGATAAAGCGAGCACTCAGGAGGTTACTAG
GGAAGGAAAGAGACTCCAGGGAAAGCTGGAGAGCTGCTTAA

Translation (316 aa):
MVNQSSPMGFLLLGFSEHPALERTLFVVVFTSYLLTLVGNTLIILLSVLYPRLHSPMYFFLSDLSFLDLC
FTTSCVPQMLVNLWGPKKTISFLGCSVQLFIFLSLGTTECILLTVMAFDRYVAVCQPLHYATIIHPRLCW
QLASVAWVMSLVQSIVQTPSTLHLPFCPHQQIDDFLCEVPSLIRLSCGDTSYNEIQLAVSSVIFVVVPLS
LILASYGATAQAVLRINSATAWRKAFGTCSSHLTVVTLFYSSVIAVYLQPKNPYAQGRGKFFGLFYAVGT
PSLNPLVYTLRNKEIKRALRRLLGKERDSRESWRAA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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