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Report for CCDS62522.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
62522.1 Public Homo sapiens 19 STXBP2 24 110 108 CCDS HistoryNCBI Gene:6813Re-query CCDS DB by CCDS ID:62522.1Re-query CCDS DB by GeneID:6813See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 14, NCBI annotation release 105, Ensembl annotation release 73

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 62522.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000441779.6 ENSP00000413606.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000441779.6Link to Ensembl Protein Viewer:ENSP00000413606.2Re-query CCDS DB by Nucleotide ID:ENST00000441779Re-query CCDS DB by Protein ID:ENSP00000413606
Original member Current member NCBI NM_001272034.2 NP_001258963.1 Accepted alive Link to Nucleotide Sequence:NM_001272034.2Link to Protein Sequence:NP_001258963.1Re-query CCDS DB by Nucleotide ID:NM_001272034Re-query CCDS DB by Protein ID:NP_001258963Link to BLAST:NP_001258963.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001258963.1 604 Q15833-3 604 100% 0 0

Chromosomal Locations for CCDS 62522.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 7637150 7637186 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 7638726 7638775 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 7639019 7639100 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 7639731 7639807 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 7640698 7640809 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 7640900 7641003 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 7641705 7641853 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 7642034 7642118 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 7642203 7642333 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 7642429 7642536 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 7642766 7642823 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 7642983 7643048 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 7643165 7643245 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 7644614 7644752 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 7645197 7645306 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 7646249 7646344 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 7647162 7647247 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 7647354 7647511 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 7647725 7647810 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1815 nt):
ATGGCGCCCTCGGGGCTGAAGGCGGTGGTGGGGGAAAAAATTCTGAGCGGAGTTATTCGGAGTGTCAAGA
AG
GATGGGGAGTGGAAGGTGCTTATCATGGATCACCCAAGCATGCGCATCTTGTCTTCCTGCTGCAAAAT
G
TCAGATATCCTGGCTGAGGGCATCACCATTGTTGAAGACATCAACAAACGGCGGGAACCCATTCCCAGT
CTG
GAGGCCATTTATTTGCTGAGCCCCACGGAGAAGGCTCAGGCCCAGAGAGTGATCCACCTTCCCCAGT
CG
GTTCAGGCCCTGATCAAAGACTTCCAGGGGACCCCGACTTTCACCTACAAAGCGGCCCATATCTTCTT
C
ACCGACACCTGCCCCGAGCCCCTGTTCAGTGAGCTAGGCCGCTCTCGTCTGGCAAAGGTGGTGAAGACG
TTG
AAGGAGATTCACCTTGCCTTCCTCCCCTACGAGGCCCAGGTGTTCTCCCTCGATGCTCCCCACAGCA
CC
TACAACCTCTACTGCCCCTTCCGGGCAGAGGAGCGCACGCGGCAGCTCGAGGTGCTGGCCCAGCAGAT
T
GCCACGCTGTGCGCCACCCTGCAGGAGTACCCGGCCATCCGCTACCGCAAGGGCCCAGAGGACACAGCC
CAG
TTGGCCCACGCCGTCCTGGCCAAGCTGAACGCCTTCAAGGCAGACACTCCCAGTCTGGGCGAGGGCC
CA
GAGAAAACCCGCTCCCAGCTGCTGATAATGGACCGGGCAGCTGACCCCGTGTCCCCACTACTGCATGA
G
CTCACGTTCCAGGCCATGGCGTATGATCTGCTGGACATAGAGCAGGACACATACAGGTATGAGACCACC
GGG
CTGAGCGAGGCGCGGGAGAAGGCCGTCTTGCTGGACGAGGACGATGACTTGTGGGTGGAGCTTCGCC
AC
ATGCATATCGCAGATGTGTCCAAGAAGGTCACGGAGCTCCTGAGGACCTTCTGTGAGAGCAAGAGGCT
G
ACCACGGACAAGGCGAACATCAAAGACCTATCCCAGATCCTGAAAAAGATGCCGCAGTACCAGAAGGAG
CTG
AATAAGTATTCTACGCACCTGCATCTAGCAGATGATTGTATGAAGCACTTCAAGGGCTCGGTGGAGA
AG
CTGTGTAGTGTGGAGCAGGACCTGGCCATGGGCTCCGACGCAGAGGGGGAGAAGATCAAGGACTCCAT
G
AAGCTGATCGTTCCGGTGCTGCTGGACGCGGCGGTGCCCGCCTACGACAAGATCCGGGTCCTGCTGCTC
TAC
ATCCTCCTTCGGAATGGTGTGAGTGAGGAGAACCTGGCCAAGCTGATCCAGCATGCCAATGTACAGG
CG
CACAGCAGCCTCATCCGTAACCTGGAGCAGCTGGGAGGCACTGTCACCAACCCCGGGGGCTCGGGGAC
C
TCCAGCCGGCTGGAGCCGAGAGAACGCATGGAGCCCACCTATCAGCTGTCCCGCTGGACCCCGGTCATC
AAG
GATGTAATGGAGGACGCCGTGGAGGACCGGCTGGACAGGAACCTGTGGCCCTTCGTATCCGACCCCG
CC
CCCACGGCCAGCTCCCAGGCCGCTGTCAGTGCCCGCTTCGGTCACTGGCACAAGAACAAGGCTGGCAT
A
GAAGCCCGGGCGGGCCCCCGGCTCATCGTGTATGTCATGGGCGGTGTGGCCATGTCAGAGATGAGGGCC
GCC
TACGAGGTGACCAGGGCCACCGAGGGCAAGTGGGAGGTGCTCATTGGCTCCTCACACATCCTCACCC
CG
ACCCGCTTCCTGGATGACCTGAAGGCACTGGACAAGAAGCTGGAGGACATTGCCCTGCCCTGA


Translation (604 aa):
MAPSGLKAVVGEKILSGVIRSVKKDGEWKVLIMDHPSMRILSSCCKMSDILAEGITIVEDINKRREPIPS
L
EAIYLLSPTEK
AQAQRVIHLPQSVQALIKDFQGTPTFTYKAAHIFFTDTCPEPLFSELGRSRLAKVVKT
L
KEIHLAFLPYEAQ
VFSLDAPHSTYNLYCPFRAEERTRQLEVLAQQIATLCATLQEYPAIRYRKGPEDTA
Q
LAHAVLAKLNAFKADTPSLGE
GPEKTRSQLLIMDRAADPVSPLLHELTFQAMAYDLLDIEQDTYRYETT
G
LSEAREKAVLLDEDDDLWVELRHMHIADVS
KKVTELLRTFCESKRLTTDKANIKDLSQILKKMPQYQKE
L
NK
YSTHLHLADDCMKHFKGSVEKLCSVEQDLAMGSDAEGEKIKDSMKLIVPVLLDAAVPAYDKIRVLLL
Y
ILLRN
GVSEENLAKLIQHANVQAHSSLIRNLEQLGGTVTNPGGSGTSSRLEPRERMEPTYQLSRWTPVI
K
DVME
DAVEDRLDRNLWPFVSDPAPTASSQAAVSARFGHWHKNKAGIEARAGPRLIVYVMGGVAMSEMRA
A
YEVTRATEGKWEVLI
GSSHILTPTRFLDDLKALDKKLEDIALP



Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser