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Report for CCDS6222.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
6222.1 Public Homo sapiens 8 PKIA 24 110 108 CCDS HistoryNCBI Gene:5569Re-query CCDS DB by CCDS ID:6222.1Re-query CCDS DB by GeneID:5569See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 6222.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000352966.9 ENSP00000336552.5 Accepted alive Link to Ensembl Transcript Viewer:ENST00000352966.9Link to Ensembl Protein Viewer:ENSP00000336552.5Re-query CCDS DB by Nucleotide ID:ENST00000352966Re-query CCDS DB by Protein ID:ENSP00000336552
Original member Current member EBI ENST00000396418.7 ENSP00000379696.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000396418.7Link to Ensembl Protein Viewer:ENSP00000379696.2Re-query CCDS DB by Nucleotide ID:ENST00000396418Re-query CCDS DB by Protein ID:ENSP00000379696
Original member Current member EBI ENST00000518467.1 ENSP00000430887.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000518467.1Link to Ensembl Protein Viewer:ENSP00000430887.1Re-query CCDS DB by Nucleotide ID:ENST00000518467Re-query CCDS DB by Protein ID:ENSP00000430887
Original member Current member NCBI NM_006823.4 NP_006814.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_006823.4Link to Protein Sequence:NP_006814.1Re-query CCDS DB by Nucleotide ID:NM_006823Re-query CCDS DB by Protein ID:NP_006814Link to BLAST:NP_006814.1
Original member Current member NCBI NM_181839.3 NP_862822.1 Accepted alive Link to Nucleotide Sequence:NM_181839.3Link to Protein Sequence:NP_862822.1Re-query CCDS DB by Nucleotide ID:NM_181839Re-query CCDS DB by Protein ID:NP_862822Link to BLAST:NP_862822.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_006814.1 76 P61925 76 100% 0 0
NP_862822.1 76 P61925 76 100% 0 0

Chromosomal Locations for CCDS 6222.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 8 (NC_000008.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 78598385 78598535 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 78601742 78601821 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (231 nt):
ATGACTGATGTGGAAACTACATATGCAGATTTTATTGCTTCAGGAAGAACAGGTAGAAGAAATGCAATAC
ATGATATCCTGGTTTCCTCTGCAAGTGGCAACAGCAATGAATTAGCCTTGAAATTAGCAGGTCTTGATAT
CAACAAGACAGAAGGTGAAGAAGATGCACAACGAAGTTCTACAGAACAAAGTGGGGAAGCCCAGGGAGAA
GCAGCAAAATCTGAAAGCTAA

Translation (76 aa):
MTDVETTYADFIASGRTGRRNAIHDILVSSASGNSNELALKLAGLDINKTEGEEDAQRSSTEQSGEAQGE
AAKSES


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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