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Report for CCDS83158.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
83158.1 Public Homo sapiens 7 UMAD1 24 110 108 CCDS HistoryNCBI Gene:729852Re-query CCDS DB by CCDS ID:83158.1Re-query CCDS DB by GeneID:729852See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 20, NCBI annotation release 108, Ensembl annotation release 85

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 83158.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000636849.1 ENSP00000489648.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000636849.1Link to Ensembl Protein Viewer:ENSP00000489648.1Re-query CCDS DB by Nucleotide ID:ENST00000636849Re-query CCDS DB by Protein ID:ENSP00000489648
Original member Current member EBI ENST00000682710.1 ENSP00000507605.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000682710.1Link to Ensembl Protein Viewer:ENSP00000507605.1Re-query CCDS DB by Nucleotide ID:ENST00000682710Re-query CCDS DB by Protein ID:ENSP00000507605
Original member Current member NCBI NM_001302348.2 NP_001289277.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001302348.2Link to Protein Sequence:NP_001289277.1Re-query CCDS DB by Nucleotide ID:NM_001302348Re-query CCDS DB by Protein ID:NP_001289277Link to BLAST:NP_001289277.1
Original member Current member NCBI NM_001302349.2 NP_001289278.1 Accepted alive Link to Nucleotide Sequence:NM_001302349.2Link to Protein Sequence:NP_001289278.1Re-query CCDS DB by Nucleotide ID:NM_001302349Re-query CCDS DB by Protein ID:NP_001289278Link to BLAST:NP_001289278.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001289277.1 137 C9J7I0 137 100% 0 0
NP_001289278.1 137 C9J7I0 137 100% 0 0

Chromosomal Locations for CCDS 83158.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 7673372 7673453 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 7801670 7801743 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 7877281 7877538 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (414 nt):
ATGTTTCACTTCTTCAGAAAGCCTCCGGAATCTAAAAAGCCCTCAGTACCAGAGACAGAAGCAGATGGAT
TCGTCCTTTTAGGAGATACAACAGATGAGCAAAGAATGACAGCAAGAGGCAAAACTTCGGACATAGAGGC
CAACCAACCTTTGGAGACCAACAAAGAAAATTCATCCAGTGTGACTGTATCAGACCCTGAGATGGAAAAT
AAGGCAGGCCAGACTCTGGAGAACAGCTCATTAATGGCCGAGCTCCTGAGCGATGTGCCGTTCACCCTGG
CCCCGCATGTGCTGGCAGTACAGGGCACCATCACTGACCTTCCCGACCACTTACTCTCCTATGATGGCAG
CGAAAACTTATCACGGTTTTGGTATGATTTCACTCTTGAAAATTCAGTGCTCTGTGATTCATAA

Translation (137 aa):
MFHFFRKPPESKKPSVPETEADGFVLLGDTTDEQRMTARGKTSDIEANQPLETNKENSSSVTVSDPEMEN
KAGQTLENSSLMAELLSDVPFTLAPHVLAVQGTITDLPDHLLSYDGSENLSRFWYDFTLENSVLCDS


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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