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Report for CCDS45947.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
45947.1 Public Homo sapiens 19 CAMSAP3 24 110 108 CCDS HistoryNCBI Gene:57662Re-query CCDS DB by CCDS ID:45947.1Re-query CCDS DB by GeneID:57662See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 45947.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000446248.4 ENSP00000416797.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000446248.4Link to Ensembl Protein Viewer:ENSP00000416797.1Re-query CCDS DB by Nucleotide ID:ENST00000446248Re-query CCDS DB by Protein ID:ENSP00000416797
Original member Current member NCBI NM_001080429.3 NP_001073898.1 Accepted alive Link to Nucleotide Sequence:NM_001080429.3Link to Protein Sequence:NP_001073898.1Re-query CCDS DB by Nucleotide ID:NM_001080429Re-query CCDS DB by Protein ID:NP_001073898Link to BLAST:NP_001073898.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001073898.1 1276 Q9P1Y5-2 1276 100% 0 0

Chromosomal Locations for CCDS 45947.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 7596003 7596150 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 7605226 7605479 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 7606271 7606393 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 7606476 7606571 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 7606777 7606809 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 7607821 7607868 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 7608126 7608264 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 7610476 7610615 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 7610700 7610793 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 7610877 7610931 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 7611095 7611168 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 7611517 7611586 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 7611687 7613163 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 7615183 7615322 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 7615418 7615719 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 7616523 7616622 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 7617326 7617438 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 7617543 7617661 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 7617752 7618057 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3831 nt):
ATGGTGGAGGCGGCGCCCCCCGGGCCCGGGCCGCTGCGGAGGACCTTTCTAGTGCCCGAGATCAAGTCGC
TGGACCAGTACGATTTCTCGCGGGCCAAGGCGGCGGCCAGCCTGGCGTGGGTGCTGCGGGCCGCGTTCGG
GGGCGCAGAGCACGTGCCCCCGGAGCTGTGGGAGCCCTTCTATACCGACCAGTACGCGCAGGAGCATGTG
AAGCCCCCGGTGACACGGCTGCTGCTCTCAGCCGAGCTCTACTGCAGAGCCTGGCGCCAGGCACTGCCAC
AGCTTGAAACACCCCCCAACCCCTCTGCACTGCTGGCCCTGCTGGCGCGGAGGGGCACAGTGCCTGCTTT
GCCCGAGCGCCCGGTGCGCGAGGCCGACCTGAGGCACCAGCCCATTCTCATGGGAGCCCACCTAGCTGTC
ATTGATGCCCTCATGGCTGCCTTTGCCTTCGAGTGGACAAAGACCCTGCCAGGTCCCTTGGCCCTGACCA
GCTTGGAGCACAAGCTGCTTTTCTGGGTGGACACGACCGTCCGGCGGCTGCAGGAGAAGACCGAGCAGGA
AGCGGCCCAGCGAGCCTCTCCAGCAGCCCCTGCAGACGGGGCGGCCCCGGCGCAGCCCTCGTGCCCTACG
CGCTGGTACTGGAAGCTGGTTCCTCACGCAATTGCCTTCTGTTTGAAGGAGTCGGGGAGCAAACCCCCCA
TGATCCGATACCGCAAGGACCGTGTGGTGGCGCGACGTGCCCCCTGCTTCCCGACGGTGACCAGCCTCCA
GGACCTGGCCAGTGGGGCCGCGCTGGCCGCCACCATCCACTGCTATTGTCCCCAGCTGCTTCGACTTGAG
GAGGTGTGCTTGAAGGACCCCATGTCTGTGGCGGACAGCCTGTACAACCTCCAGCTCGTGCAGGATTTCT
GTGCCTCTCGCCTTCCTCGTGGCTGCCCCCTGTCCCTTGAGGACTTGCTGTACGTCCCACCGCCACTCAA
GGTCAACTTGGTGGTGATGCTGGCCGAGTTGTTCATGTGTTTTGAGGTGCTCAAGCCCGACTTTGTGCAA
GTGAAGGACTTGCCCGATGGTCACGCTGCCTCCCCCCGGGGCACTGAGGCCTCCCCACCTCAGAACAACA
GCGGCAGTAGTTCTCCTGTCTTCACCTTCCGCCACCCGCTTCTGTCATCTGGTGGCCCCCAGTCCCCACT
CCGAGGATCCACAGGCTCCCTGAAGTCTTCCCCGTCCATGTCCCATATGGAGGCCCTGGGCAAGGCCTGG
AACCGGCAGCTCAGCCGTCCCCTCTCCCAGGCTGTGTCATTCAGCACCCCCTTTGGCCTGGACAGCGACG
TGGATGTCGTCATGGGAGACCCTGTGCTCCTCCGCTCTGTGAGCTCGGACAGCCTGGGCCCCCCGCGTCC
CGCGCCGGCCAGGACCCCCACCCAGCCACCCCCGGAGCCTGGTGACCTGCCCACCATCGAGGAAGCTCTG
CAGATCATCCACAGTGCCGAGCCCCGGCTCCTCCCAGATGGGGCGGCCGACGGCAGCTTCTACCTCCACT
CCCCTGAGGGGCCCTCCAAGCCATCCCTGGCCTCCCCCTACCTGCCCGAGGGGACCTCCAAACCACTGTC
CGACAGGCCCACCAAAGCACCAGTGTACATGCCACACCCCGAGACCCCCTCGAAACCATCTCCCTGTCTG
GTGGGGGAGGCATCGAAACCGCCAGCCCCATCCGAGGGGTCCCCGAAGGCGGTGGCTTCGTCCCCAGCAG
CCACCAACTCCGAGGTGAAAATGACCAGCTTTGCAGAACGCAAGAAACAGCTGGTGAAGGCAGAGGCTGA
GGCCGGAGCGGGGTCCCCCACGTCCACTCCGGCCCCGCCGGAGGCCCTGAGCTCGGAGATGAGTGAGCTC
AGCGCCCGGCTGGAGGAGAAACGCAGAGCCATCGAGGCTCAGAAGCGACGGATTGAGGCCATATTCGCCA
AGCACCGCCAGCGGCTGGGCAAAAGCGCCTTCCTGCAGGTGCAGCCGCGGGAAGCCTCTGGGGAGGCGGA
AGCAGAGGCGGAGGAGGCCGATTCCGGTCCAGTCCCTGGTGGGGAGCGGCCCGCAGGCGAGGGCCAGGGT
GAGCCAACCTCACGGCCCAAGGCAGTGACCTTCTCGCCAGACCTGGGCCCGGTGCCCCACGAGGGGCTGG
GGGAATACAATCGAGCGGTCAGCAAGCTGAGTGCCGCCTTGAGCTCGCTGCAGCGGGACATGCAGAGGCT
CACGGACCAGCAGCAGCGGCTCCTGGCCCCGCCCGAGGCCCCCGGATCCGCCCCACCACCTGCTGCGTGG
GTCATCCCTGGCCCCACGACGGGGCCCAAAGCTGCATCCCCCAGCCCCGCCCGGCGAGTCCCGGCCACCC
GGCGCAGCCCTGGGCCCGGGCCCAGCCAGTCACCCCGCAGCCCGAAACACACGCGGCCAGCGGAGCTGCG
GCTGGCACCCTTGACCAGGGTGCTTACGCCACCCCACGACGTAGACAGCCTCCCCCACCTGCGCAAGTTC
TCGCCGAGCCAGGTGCCCGTGCAGACGCGCTCTTCCATCCTCCTGGCGGAGGAGACGCCCCCCGAGGAGC
CAGCCGCCCGGCCGGGCCTCATCGAGATCCCGCTGGGCAGCCTGGCAGATCCCGCCGCCGAGGACGAGGG
AGACGGGAGCCCCGCTGGTGCTGAGGATTCCTTGGAGGAGGAGGCGTCTTCGGAGGGGGAGCCCCGGGTG
GGGCTGGGGTTCTTCTACAAGGATGAAGACAAGCCTGAGGACGAGATGGCCCAAAAGCGGGCCAGCCTGC
TGGAGCGGCAGCAGCGGCGAGCAGAGGAGGCGCGGCGGCGCAAGCAGTGGCAGGAGGTGGAGAAGGAACA
GCGGAGGGAGGAGGCCGCGAGGCTGGCCCAAGAGGAGGCCCCGGGCCCAGCCCCGCTTGTGTCCGCAGTC
CCGATGGCGACTCCAGCCCCTGCTGCCCGGGCTCCAGCCGAGGAGGAGGTGGGCCCCCGGAAGGGGGACT
TCACGCGGCAGGAGTACGAGCGCCGGGCCCAGCTGAAGCTGATGGACGACCTCGATAAGGTGCTGCGGCC
CCGGGCTGCGGGGTCCGGGGGTCCAGGTCGGGGCGGGCGGAGGGCCACCCGGCCTCGCTCGGGTTGCTGT
GACGACTCAGCCCTGGCACGAAGCCCAGCCCGCGGCCTGCTGGGCTCTCGGCTGAGCAAAATCTATTCCC
AGTCCACCCTGTCACTGTCCACTGTGGCCAACGAGGCCCACAATAACCTCGGGGTGAAGAGGCCCACGTC
TCGGGCTCCCTCCCCGTCAGGTCTCATGTCCCCAAGCCGCCTGCCTGGAAGCCGCGAACGGGACTGGGAA
AATGGCAGCAATGCCTCCTCCCCAGCGTCAGTGCCCGAGTACACAGGTCCACGGCTGTACAAAGAACCCA
GCGCCAAGTCCAACAAGTTCATCATCCACAATGCCCTATCACACTGCTGCCTGGCGGGCAAGGTGAACGA
ACCGCAGAAGAATCGCATTCTGGAGGAAATTGAGAAAAGCAAGGCCAACCACTTCCTGATCCTCTTTCGC
GACTCGAGCTGCCAGTTCCGGGCGCTCTACACGCTGTCGGGGGAGACAGAGGAGCTGTCGCGGCTGGCAG
GGTATGGGCCCCGGACCGTCACGCCCGCCATGGTGGAAGGCATCTACAAGTACAACTCGGACCGCAAGCG
CTTCACCCAGATCCCCGCCAAGACCATGTCCATGAGCGTCGATGCCTTCACCATCCAGGGACACCTCTGG
CAGGGCAAGAAACCCACCACTCCCAAGAAGGGCGGCGGCACCCCCAAATAG

Translation (1276 aa):
MVEAAPPGPGPLRRTFLVPEIKSLDQYDFSRAKAAASLAWVLRAAFGGAEHVPPELWEPFYTDQYAQEHV
KPPVTRLLLSAELYCRAWRQALPQLETPPNPSALLALLARRGTVPALPERPVREADLRHQPILMGAHLAV
IDALMAAFAFEWTKTLPGPLALTSLEHKLLFWVDTTVRRLQEKTEQEAAQRASPAAPADGAAPAQPSCPT
RWYWKLVPHAIAFCLKESGSKPPMIRYRKDRVVARRAPCFPTVTSLQDLASGAALAATIHCYCPQLLRLE
EVCLKDPMSVADSLYNLQLVQDFCASRLPRGCPLSLEDLLYVPPPLKVNLVVMLAELFMCFEVLKPDFVQ
VKDLPDGHAASPRGTEASPPQNNSGSSSPVFTFRHPLLSSGGPQSPLRGSTGSLKSSPSMSHMEALGKAW
NRQLSRPLSQAVSFSTPFGLDSDVDVVMGDPVLLRSVSSDSLGPPRPAPARTPTQPPPEPGDLPTIEEAL
QIIHSAEPRLLPDGAADGSFYLHSPEGPSKPSLASPYLPEGTSKPLSDRPTKAPVYMPHPETPSKPSPCL
VGEASKPPAPSEGSPKAVASSPAATNSEVKMTSFAERKKQLVKAEAEAGAGSPTSTPAPPEALSSEMSEL
SARLEEKRRAIEAQKRRIEAIFAKHRQRLGKSAFLQVQPREASGEAEAEAEEADSGPVPGGERPAGEGQG
EPTSRPKAVTFSPDLGPVPHEGLGEYNRAVSKLSAALSSLQRDMQRLTDQQQRLLAPPEAPGSAPPPAAW
VIPGPTTGPKAASPSPARRVPATRRSPGPGPSQSPRSPKHTRPAELRLAPLTRVLTPPHDVDSLPHLRKF
SPSQVPVQTRSSILLAEETPPEEPAARPGLIEIPLGSLADPAAEDEGDGSPAGAEDSLEEEASSEGEPRV
GLGFFYKDEDKPEDEMAQKRASLLERQQRRAEEARRRKQWQEVEKEQRREEAARLAQEEAPGPAPLVSAV
PMATPAPAARAPAEEEVGPRKGDFTRQEYERRAQLKLMDDLDKVLRPRAAGSGGPGRGGRRATRPRSGCC
DDSALARSPARGLLGSRLSKIYSQSTLSLSTVANEAHNNLGVKRPTSRAPSPSGLMSPSRLPGSRERDWE
NGSNASSPASVPEYTGPRLYKEPSAKSNKFIIHNALSHCCLAGKVNEPQKNRILEEIEKSKANHFLILFR
DSSCQFRALYTLSGETEELSRLAGYGPRTVTPAMVEGIYKYNSDRKRFTQIPAKTMSMSVDAFTIQGHLW
QGKKPTTPKKGGGTPK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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