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Report for CCDS82391.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
82391.1 Public Homo sapiens 19 ZNF160 24 110 108 CCDS HistoryNCBI Gene:90338Re-query CCDS DB by CCDS ID:82391.1Re-query CCDS DB by GeneID:90338See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 20, NCBI annotation release 108, Ensembl annotation release 85

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 82391.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000601421.5 ENSP00000470573.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000601421.5Link to Ensembl Protein Viewer:ENSP00000470573.1Re-query CCDS DB by Nucleotide ID:ENST00000601421Re-query CCDS DB by Protein ID:ENSP00000470573
Original member Current member NCBI NM_001322137.2 NP_001309066.1 Accepted alive Link to Nucleotide Sequence:NM_001322137.2Link to Protein Sequence:NP_001309066.1Re-query CCDS DB by Nucleotide ID:NM_001322137Re-query CCDS DB by Protein ID:NP_001309066Link to BLAST:NP_001309066.1
Original member Current member NCBI NM_001322138.2 NP_001309067.1 Accepted alive Link to Nucleotide Sequence:NM_001322138.2Link to Protein Sequence:NP_001309067.1Re-query CCDS DB by Nucleotide ID:NM_001322138Re-query CCDS DB by Protein ID:NP_001309067Link to BLAST:NP_001309067.1
Original member Current member NCBI NM_001322139.2 NP_001309068.1 Accepted alive Link to Nucleotide Sequence:NM_001322139.2Link to Protein Sequence:NP_001309068.1Re-query CCDS DB by Nucleotide ID:NM_001322139Re-query CCDS DB by Protein ID:NP_001309068Link to BLAST:NP_001309068.1

Chromosomal Locations for CCDS 82391.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 53068077 53070262 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 53074140 53074268 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 53075057 53075090 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2349 nt):
ATGTTGGAGAACTACTGGAACCTTGTTTCTCTGGGACTGTGTCATTTTGATATGAATATTATCTCCATGT
TGGAGGAAGGGAAAGAGCCCTGGACTGTGAAGAGCTGTGTGAAAATAGCAAGAAAACCAAGAACGCCGGA
ATGTGTCAAAGGCGTGGTCACAGATATCCCTCCTAAATGTACAATCAAGGATTTGCTACCAAAAGAGAAG
AGCAGTACAGAAGCAGTATTCCACACAGTGGTGTTGGAAAGACACGAAAGCCCTGACATTGAAGACTTTT
CCTTCAAGGAACCCCAGAAAAATGTGCATGATTTTGAGTGTCAATGGAGAGATGACACAGGAAATTACAA
GGGAGTGCTTATGGCCCAGAAAGAAGGTAAAAGAGATCAACGCGACAGAAGAGACATAGAAAACAAGCTT
ATGAACAATCAGCTTGGAGTAAGCTTTCATTCTCATCTGCCTGAACTGCAGCTATTTCAAGGTGAGGGGA
AAATGTATGAATGTAATCAAGTTGAGAAGTCTACCAACAATGGTTCCTCAGTGTCACCACTTCAACAAAT
TCCTTCTAGTGTCCAAACCCACAGGTCTAAAAAATATCATGAACTTAACCATTTTTCATTACTCACACAA
AGACGAAAAGCAAACAGTTGTGGAAAACCTTATAAATGTAATGAATGTGGCAAGGCGTTCACTCAGAATT
CGAACCTTACAAGTCATAGGAGAATTCATAGTGGAGAGAAGCCTTACAAATGCAGTGAGTGCGGCAAAAC
CTTTACTGTTCGTTCAAATCTAACTATTCATCAGGTCATCCATACTGGAGAAAAACCTTACAAATGTCAT
GAGTGTGGCAAGGTCTTCAGGCACAATTCATACCTTGCAACTCATCGGCGAATTCATACTGGAGAGAAAC
CTTACAAGTGTAATGAGTGTGGAAAAGCCTTTAGAGGACATTCAAACCTAACTACCCATCAGTTAATTCA
TACTGGAGAAAAACCGTTCAAATGTAATGAATGTGGCAAGCTCTTCACTCAAAATTCACACCTTATAAGT
CATTGGAGAATTCACACTGGAGAGAAACCTTACAAGTGCAATGAGTGCGGCAAAGCCTTTAGTGTTCGTT
CAAGCCTAGCAATCCATCAGACAATCCACACTGGAGAAAAACCTTACAAATGTAATGAATGTGGCAAAGT
CTTTAGGTACAATTCATACCTCGGAAGGCATCGGAGAGTTCATACTGGTGAGAAACCTTACAAGTGTAAT
GAATGTGGCAAAGCCTTCAGTATGCATTCAAACCTAGCTACCCATCAGGTCATCCATACTGGAACAAAAC
CTTTCAAATGCAATGAATGCAGCAAGGTTTTCACTCAAAATTCACAACTTGCAAATCATCGAAGAATTCA
TACTGGAGAGAAACCTTACAAGTGTAATGAGTGTGGGAAAGCCTTCAGTGTTCGTTCAAGTCTGACTACC
CATCAGGCAATCCATTCTGGAGAGAAACCTTACAAATGTATTGAATGTGGCAAGAGCTTCACTCAAAAAT
CACACCTTAGAAGTCATCGGGGAATTCATTCTGGAGAGAAACCTTACAAGTGTAATGAATGTGGTAAAGT
CTTCGCTCAAACATCACAACTTGCAAGGCATTGGAGAGTTCATACTGGAGAAAAACCTTACAAGTGTAAT
GACTGTGGCAGAGCCTTTAGTGATCGTTCAAGCCTAACTTTTCATCAGGCAATACATACTGGAGAGAAAC
CTTACAAATGTCATGAATGCGGCAAGGTTTTTAGGCACAATTCATACCTTGCAACTCATCGGCGAATTCA
TACTGGAGAGAAACCTTACAAGTGTAATGAGTGTGGGAAAGCCTTTAGTATGCATTCAAACCTAACTACC
CATAAGGTCATCCATACTGGAGAGAAGCCTTACAAATGTAATCAATGTGGCAAGGTCTTCACTCAGAACT
CACACCTTGCAAATCATCAAAGGACTCACACCGGAGAGAAACCTTACCGATGCAATGAGTGTGGGAAAGC
CTTCAGTGTTCGTTCAAGCCTAACCACCCATCAGGCAATCCATACTGGGAAAAAACCTTACAAATGTAAT
GAATGTGGCAAGGTCTTTACTCAAAATGCTCACCTGGCAAATCACCGAAGAATTCATACTGGGGAGAAAC
CTTACAGGTGTACAGAGTGTGGGAAAGCCTTTAGGGTAAGATCAAGTCTAACTACCCATATGGCAATCCA
CACTGGAGAAAAGCGTTACAAATGTAATGAGTGTGGCAAGGTCTTCAGGCAGAGTTCAAATCTTGCAAGT
CATCACAGAATGCATACCGGAGAGAAACCTTACAAATGA

Translation (782 aa):
MLENYWNLVSLGLCHFDMNIISMLEEGKEPWTVKSCVKIARKPRTPECVKGVVTDIPPKCTIKDLLPKEK
SSTEAVFHTVVLERHESPDIEDFSFKEPQKNVHDFECQWRDDTGNYKGVLMAQKEGKRDQRDRRDIENKL
MNNQLGVSFHSHLPELQLFQGEGKMYECNQVEKSTNNGSSVSPLQQIPSSVQTHRSKKYHELNHFSLLTQ
RRKANSCGKPYKCNECGKAFTQNSNLTSHRRIHSGEKPYKCSECGKTFTVRSNLTIHQVIHTGEKPYKCH
ECGKVFRHNSYLATHRRIHTGEKPYKCNECGKAFRGHSNLTTHQLIHTGEKPFKCNECGKLFTQNSHLIS
HWRIHTGEKPYKCNECGKAFSVRSSLAIHQTIHTGEKPYKCNECGKVFRYNSYLGRHRRVHTGEKPYKCN
ECGKAFSMHSNLATHQVIHTGTKPFKCNECSKVFTQNSQLANHRRIHTGEKPYKCNECGKAFSVRSSLTT
HQAIHSGEKPYKCIECGKSFTQKSHLRSHRGIHSGEKPYKCNECGKVFAQTSQLARHWRVHTGEKPYKCN
DCGRAFSDRSSLTFHQAIHTGEKPYKCHECGKVFRHNSYLATHRRIHTGEKPYKCNECGKAFSMHSNLTT
HKVIHTGEKPYKCNQCGKVFTQNSHLANHQRTHTGEKPYRCNECGKAFSVRSSLTTHQAIHTGKKPYKCN
ECGKVFTQNAHLANHRRIHTGEKPYRCTECGKAFRVRSSLTTHMAIHTGEKRYKCNECGKVFRQSSNLAS
HHRMHTGEKPYK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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