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Report for CCDS94153.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
94153.1 Public Homo sapiens 7 TAF6 24 110 108 CCDS HistoryNCBI Gene:6878Re-query CCDS DB by CCDS ID:94153.1Re-query CCDS DB by GeneID:6878See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 94153.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000692408.1 ENSP00000508788.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000692408.1Link to Ensembl Protein Viewer:ENSP00000508788.1Re-query CCDS DB by Nucleotide ID:ENST00000692408Re-query CCDS DB by Protein ID:ENSP00000508788
Original member Current member EBI ENST00000687151.1 ENSP00000508852.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000687151.1Link to Ensembl Protein Viewer:ENSP00000508852.1Re-query CCDS DB by Nucleotide ID:ENST00000687151Re-query CCDS DB by Protein ID:ENSP00000508852
Original member Current member EBI ENST00000691010.1 ENSP00000509320.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000691010.1Link to Ensembl Protein Viewer:ENSP00000509320.1Re-query CCDS DB by Nucleotide ID:ENST00000691010Re-query CCDS DB by Protein ID:ENSP00000509320
Original member Current member EBI ENST00000687672.1 ENSP00000509741.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000687672.1Link to Ensembl Protein Viewer:ENSP00000509741.1Re-query CCDS DB by Nucleotide ID:ENST00000687672Re-query CCDS DB by Protein ID:ENSP00000509741
Original member Current member EBI ENST00000690367.1 ENSP00000509821.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000690367.1Link to Ensembl Protein Viewer:ENSP00000509821.1Re-query CCDS DB by Nucleotide ID:ENST00000690367Re-query CCDS DB by Protein ID:ENSP00000509821
Original member Current member EBI ENST00000686172.1 ENSP00000510809.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000686172.1Link to Ensembl Protein Viewer:ENSP00000510809.1Re-query CCDS DB by Nucleotide ID:ENST00000686172Re-query CCDS DB by Protein ID:ENSP00000510809
Original member Current member NCBI NM_001365000.1 NP_001351929.1 Accepted alive Link to Nucleotide Sequence:NM_001365000.1Link to Protein Sequence:NP_001351929.1Re-query CCDS DB by Nucleotide ID:NM_001365000Re-query CCDS DB by Protein ID:NP_001351929Link to BLAST:NP_001351929.1
Original member Current member NCBI NM_001365001.1 NP_001351930.1 Accepted alive Link to Nucleotide Sequence:NM_001365001.1Link to Protein Sequence:NP_001351930.1Re-query CCDS DB by Nucleotide ID:NM_001365001Re-query CCDS DB by Protein ID:NP_001351930Link to BLAST:NP_001351930.1
Original member Current member NCBI NM_001365002.1 NP_001351931.1 Accepted alive Link to Nucleotide Sequence:NM_001365002.1Link to Protein Sequence:NP_001351931.1Re-query CCDS DB by Nucleotide ID:NM_001365002Re-query CCDS DB by Protein ID:NP_001351931Link to BLAST:NP_001351931.1
Original member Current member NCBI NM_001365003.1 NP_001351932.1 Accepted alive Link to Nucleotide Sequence:NM_001365003.1Link to Protein Sequence:NP_001351932.1Re-query CCDS DB by Nucleotide ID:NM_001365003Re-query CCDS DB by Protein ID:NP_001351932Link to BLAST:NP_001351932.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001351929.1 667 P49848-4 667 100% 0 0
NP_001351930.1 667 P49848-4 667 100% 0 0
NP_001351931.1 667 P49848-4 667 100% 0 0
NP_001351932.1 667 P49848-4 667 100% 0 0

Chromosomal Locations for CCDS 94153.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 100107246 100107623 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 100107926 100108123 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 100108367 100108540 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 100109948 100110073 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 100110200 100110274 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 100111139 100111321 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 100111728 100111829 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 100111922 100111999 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 100112108 100112253 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 100112798 100112917 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 100113349 100113405 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 100113616 100113769 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 100113868 100113954 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 100114084 100114209 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2004 nt):
ATGGCTGAGGAGAAGAAGCTGAAGCTTAGCAACACTGTGCTGCCCTCGGAGTCCATGAAGGTGGTGGCTG
AATCCATGGGCATCGCCCAGATTCAGGAGGAGACCTGCCAGCTGCTAACGGATGAGGATGCCTTGAAGTT
CATGCACATGGGGAAGCGGCAGAAGCTCACCACCAGTGACATTGACTACGCCTTGAAGCTAAAGAATGTC
GAGCCACTCTATGGCTTCCACGCCCAGGAGTTCATTCCTTTCCGCTTCGCCTCTGGTGGGGGCCGGGAGC
TTTACTTCTATGAGGAGAAGGAGGTTGATCTGAGCGACATCATCAATACCCCTCTGCCCCGGGTGCCCCT
GGACGTCTGCCTCAAAGCTCATTGGCTGAGCATCGAGGGCTGCCAGCCAGCTATCCCCGAGAACCCGCCC
CCAGCTCCCAAAGAGCAACAGAAGGCTGAAGCCACAGAACCCCTGAAGTCAGCCAAGCCAGGCCAGGAGG
AAGACGGACCCCTGAAGGGCAAAGGTCAAGGGGCCACCACAGCCGACGGCAAAGGGAAAGAGAAGAAGGC
GCCGCCCTTGCTGGAGGGGGCCCCCTTGCGACTGAAGCCCCGGAGCATCCACGAGTTGTCTGTGGAGCAG
CAGCTCTACTACAAGGAGATCACCGAGGCCTGCGTGGGCTCCTGCGAGGCCAAGAGGGCGGAAGCCCTGC
AAAGCATTGCCACGGACCCTGGACTGTATCAGATGCTGCCACGGTTCAGTACCTTTATCTCGGAGGGGGT
CCGTGTGAACGTGGTTCAGAACAACCTGGCCCTACTCATCTACCTGATGCGTATGGTGAAAGCGCTGATG
GACAACCCCACGCTCTATCTAGAAAAATACGTCCATGAGCTGATTCCAGCTGTGATGACCTGCATCGTGA
GCAGACAGTTGTGCCTGCGACCAGATGTGGACAATCACTGGGCACTCCGAGACTTTGCTGCCCGCCTGGT
GGCCCAGATCTGCAAGCATTTTAGCACAACCACTAACAACATCCAGTCCCGGATCACCAAGACCTTCACC
AAGAGCTGGGTGGACGAGAAGACGCCCTGGACGACTCGTTATGGCTCCATCGCAGGCTTGGCTGAGCTGG
GACACGATGTTATCAAGACTCTGATTCTGCCCCGGCTGCAGCAGGAAGGGGAGCGGATCCGCAGTGTGCT
GGACGGCCCTGTGCTGAGCAACATTGACCGGATTGGAGCAGACCATGTGCAGAGCCTCCTGCTGAAACAC
TGTGCTCCTGTTCTGGCAAAGCTGCGCCCACCGCCTGACAATCAGGACGCCTATCGGGCAGAATTCGGGT
CCCTTGGGCCCCTCCTCTGCTCCCAGGTGGTCAAGGCTCGGGCCCAGGCTGCTCTGCAGGCTCAGCAGGT
CAACAGGACCACTCTGACCATCACGCAGCCCCGGCCCACGCTGACCCTCTCGCAGGCCCCACAGCCTGGC
CCTCGCACCCCTGGCTTGCTGAAGGTTCCTGGCTCCATCGCACTTCCTGTCCAGACACTGGTGTCTGCAC
GAGCGGCTGCCCCACCACAGCCTTCCCCTCCTCCAACCAAGTTTATTGTAATGTCATCGTCCTCCAGCGC
CCCATCCACCCAGCAGGTCCTGTCCCTCAGCACCTCGGCCCCCGGCTCAGGTTCCACCACCACTTCGCCC
GTCACCACCACCGTCCCCAGCGTGCAGCCCATCGTCAAGTTGGTCTCCACCGCCACCACCGCACCCCCCA
GCACTGCTCCCTCTGGTCCTGGGAGTGTCCAGAAGTACATCGTGGTCTCACTTCCCCCAACAGGGGAGGG
CAAAGGAGGCCCCACCTCCCATCCTTCTCCAGTTCCTCCCCCGGCATCGTCCCCGTCCCCACTCAGCGGC
AGTGCCCTTTGTGGGGGGAAGCAGGAGGCTGGGGACAGTCCCCCTCCAGCTCCAGGGACTCCAAAAGCCA
ATGGCTCCCAGCCCAACTCCGGCTCCCCTCAGCCTGCTCCGTGA

Translation (667 aa):
MAEEKKLKLSNTVLPSESMKVVAESMGIAQIQEETCQLLTDEDALKFMHMGKRQKLTTSDIDYALKLKNV
EPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDIINTPLPRVPLDVCLKAHWLSIEGCQPAIPENPP
PAPKEQQKAEATEPLKSAKPGQEEDGPLKGKGQGATTADGKGKEKKAPPLLEGAPLRLKPRSIHELSVEQ
QLYYKEITEACVGSCEAKRAEALQSIATDPGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALM
DNPTLYLEKYVHELIPAVMTCIVSRQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQSRITKTFT
KSWVDEKTPWTTRYGSIAGLAELGHDVIKTLILPRLQQEGERIRSVLDGPVLSNIDRIGADHVQSLLLKH
CAPVLAKLRPPPDNQDAYRAEFGSLGPLLCSQVVKARAQAALQAQQVNRTTLTITQPRPTLTLSQAPQPG
PRTPGLLKVPGSIALPVQTLVSARAAAPPQPSPPPTKFIVMSSSSSAPSTQQVLSLSTSAPGSGSTTTSP
VTTTVPSVQPIVKLVSTATTAPPSTAPSGPGSVQKYIVVSLPPTGEGKGGPTSHPSPVPPPASSPSPLSG
SALCGGKQEAGDSPPPAPGTPKANGSQPNSGSPQPAP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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