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Report for CCDS8901.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
8901.2 Public Homo sapiens 12 SUOX 24 110 108 CCDS HistoryNCBI Gene:6821Re-query CCDS DB by CCDS ID:8901.2Re-query CCDS DB by GeneID:6821See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 8901.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000266971.8 ENSP00000266971.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000266971.8Link to Ensembl Protein Viewer:ENSP00000266971.3Re-query CCDS DB by Nucleotide ID:ENST00000266971Re-query CCDS DB by Protein ID:ENSP00000266971
Original member Current member EBI ENST00000356124.8 ENSP00000348440.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000356124.8Link to Ensembl Protein Viewer:ENSP00000348440.4Re-query CCDS DB by Nucleotide ID:ENST00000356124Re-query CCDS DB by Protein ID:ENSP00000348440
Original member Current member EBI ENST00000394109.7 ENSP00000377668.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000394109.7Link to Ensembl Protein Viewer:ENSP00000377668.3Re-query CCDS DB by Nucleotide ID:ENST00000394109Re-query CCDS DB by Protein ID:ENSP00000377668
Original member Current member EBI ENST00000394115.6 ENSP00000377674.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000394115.6Link to Ensembl Protein Viewer:ENSP00000377674.2Re-query CCDS DB by Nucleotide ID:ENST00000394115Re-query CCDS DB by Protein ID:ENSP00000377674
Original member Current member EBI ENST00000548274.5 ENSP00000450245.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000548274.5Link to Ensembl Protein Viewer:ENSP00000450245.1Re-query CCDS DB by Nucleotide ID:ENST00000548274Re-query CCDS DB by Protein ID:ENSP00000450245
Original member Current member EBI ENST00000550065.1 ENSP00000450264.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000550065.1Link to Ensembl Protein Viewer:ENSP00000450264.1Re-query CCDS DB by Nucleotide ID:ENST00000550065Re-query CCDS DB by Protein ID:ENSP00000450264
Original member Current member NCBI NM_000456.3 NP_000447.2 Accepted alive Link to Nucleotide Sequence:NM_000456.3Link to Protein Sequence:NP_000447.2Re-query CCDS DB by Nucleotide ID:NM_000456Re-query CCDS DB by Protein ID:NP_000447Link to BLAST:NP_000447.2
Original member Current member NCBI NM_001032386.2 NP_001027558.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001032386.2Link to Protein Sequence:NP_001027558.1Re-query CCDS DB by Nucleotide ID:NM_001032386Re-query CCDS DB by Protein ID:NP_001027558Link to BLAST:NP_001027558.1
Original member Current member NCBI NM_001032387.2 NP_001027559.1 Accepted alive Link to Nucleotide Sequence:NM_001032387.2Link to Protein Sequence:NP_001027559.1Re-query CCDS DB by Nucleotide ID:NM_001032387Re-query CCDS DB by Protein ID:NP_001027559Link to BLAST:NP_001027559.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_000447.2 545 P51687 545 100% 0 0
NP_001027558.1 545 P51687 545 100% 0 0
NP_001027559.1 545 P51687 545 100% 0 0

Chromosomal Locations for CCDS 8901.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 56002222 56002271 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 56002543 56002720 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 56003618 56005027 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1638 nt):
ATGCTGCTGCTGCACAGAGCTGTGGTCCTCAGGCTCCAACAGGCCTGCAGACTCAAGTCAATCCCCTCAA
GGATCTGCATTCAGGCCTGCTCCACAAATGATTCATTTCAGCCCCAGCGCCCCAGCCTCACCTTCTCTGG
TGATAACTCCAGCACCCAGGGATGGAGAGTCATGGGGACCCTATTAGGTCTCGGTGCAGTGTTGGCCTAT
CAGGACCATCGGTGTAGGGCTGCTCAGGAGTCAACACACATATACACTAAGGAGGAAGTGAGTTCCCACA
CCAGCCCTGAGACTGGGATCTGGGTGACTCTGGGCTCTGAGGTCTTTGATGTCACAGAATTTGTGGACCT
ACATCCAGGGGGGCCTTCAAAGCTGATGCTAGCAGCTGGGGGTCCCCTAGAGCCCTTCTGGGCCCTCTAT
GCTGTTCACAACCAGTCCCATGTGCGTGAGTTACTGGCTCAGTACAAGATTGGGGAGCTGAATCCTGAAG
ACAAGGTAGCCCCCACCGTGGAGACCTCTGACCCTTATGCTGATGATCCTGTACGTCACCCAGCCCTGAA
GGTCAACAGCCAGCGGCCCTTTAATGCAGAGCCTCCCCCTGAGCTGCTGACAGAAAACTACATCACACCC
AACCCTATCTTCTTCACCCGGAACCATCTGCCTGTACCTAACCTGGATCCAGACACCTATCGCTTACACG
TAGTAGGAGCACCTGGGGGTCAGTCACTGTCTCTTTCCCTGGATGACTTGCACAACTTTCCCAGGTACGA
GATCACAGTCACTCTGCAGTGTGCCGGCAACCGACGCTCTGAGATGACTCAGGTCAAAGAAGTAAAAGGT
CTGGAGTGGAGAACAGGAGCCATCAGCACTGCACGCTGGGCTGGGGCACGGCTCTGTGATGTGTTAGCCC
AGGCTGGCCACCAACTCTGTGAAACTGAGGCCCACGTCTGCTTTGAGGGACTGGACTCAGACCCTACTGG
GACTGCCTATGGAGCATCCATCCCTCTGGCTCGGGCCATGGACCCTGAAGCTGAGGTCCTGCTGGCATAT
GAGATGAATGGGCAGCCTCTGCCACGTGACCACGGCTTCCCTGTGCGTGTGGTGGTTCCTGGAGTGGTGG
GTGCCCGCCATGTCAAATGGCTGGGCAGAGTGAGTGTGCAGCCAGAGGAAAGTTACAGCCACTGGCAACG
GCGGGATTACAAAGGCTTCTCTCCATCTGTGGACTGGGAGACTGTAGATTTTGACTCTGCTCCATCCATT
CAGGAACTTCCTGTCCAGTCGGCCATCACAGAGCCCCGGGATGGAGAGACTGTAGAATCAGGGGAGGTGA
CCATCAAGGGCTATGCATGGAGTGGTGGTGGCAGGGCTGTGATCCGGGTGGATGTGTCTCTGGATGGGGG
CCTAACCTGGCAGGTGGCTAAGCTGGATGGAGAGGAACAGCGCCCCAGGAAGGCCTGGGCATGGCGTCTG
TGGCAGTTGAAAGCCCCTGTGCCAGCTGGACAAAAGGAACTGAACATTGTTTGTAAGGCTGTGGATGATG
GTTACAATGTGCAGCCAGACACCGTGGCCCCAATCTGGAACCTGCGAGGTGTTCTCAGCAATGCCTGGCA
TCGTGTCCATGTCTATGTCTCCCCATGA

Translation (545 aa):
MLLLHRAVVLRLQQACRLKSIPSRICIQACSTNDSFQPQRPSLTFSGDNSSTQGWRVMGTLLGLGAVLAY
QDHRCRAAQESTHIYTKEEVSSHTSPETGIWVTLGSEVFDVTEFVDLHPGGPSKLMLAAGGPLEPFWALY
AVHNQSHVRELLAQYKIGELNPEDKVAPTVETSDPYADDPVRHPALKVNSQRPFNAEPPPELLTENYITP
NPIFFTRNHLPVPNLDPDTYRLHVVGAPGGQSLSLSLDDLHNFPRYEITVTLQCAGNRRSEMTQVKEVKG
LEWRTGAISTARWAGARLCDVLAQAGHQLCETEAHVCFEGLDSDPTGTAYGASIPLARAMDPEAEVLLAY
EMNGQPLPRDHGFPVRVVVPGVVGARHVKWLGRVSVQPEESYSHWQRRDYKGFSPSVDWETVDFDSAPSI
QELPVQSAITEPRDGETVESGEVTIKGYAWSGGGRAVIRVDVSLDGGLTWQVAKLDGEEQRPRKAWAWRL
WQLKAPVPAGQKELNIVCKAVDDGYNVQPDTVAPIWNLRGVLSNAWHRVHVYVSP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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