CCDS Report for Consensus CDS

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Report for CCDS77305.1 (current version)

CCDS	Status	Species	Chrom.	Gene	CCDS Release	NCBI Annotation Release	Ensembl Annotation Release	Links
77305.1	Public	Homo sapiens	19	GRIK5	24	110	108

Public since: CCDS release 18, NCBI annotation release 107, Ensembl annotation release 79

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 77305.1

Original	Current	Source	Nucleotide ID	Protein ID	MANE	Status in CCDS	Seq. Status	Links
		EBI	ENST00000301218.8	ENSP00000301218.3		Accepted	alive
		NCBI	NM_001301030.2	NP_001287959.1		Accepted	alive

RefSeq	Length	Related UniProtKB/SwissProt	Length	Identity	Gaps	Mismatches
NP_001287959.1	981	Q16478-2	981	100%	0	0

Chromosomal Locations for CCDS 77305.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)

Genome Browser links:

Chromosome	Start	Stop
19	42002115	42002546
19	42003332	42003453
19	42003555	42003683
19	42005723	42005948
19	42006645	42006810
19	42021301	42021474
19	42021947	42022056
19	42022241	42022354
19	42042552	42042755
19	42053602	42053709
19	42053825	42053929
19	42054320	42054472
19	42056662	42056823
19	42056925	42056978
19	42059349	42059527
19	42062488	42062653
19	42062758	42062855
19	42065223	42065387
19	42065692	42065770

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.

Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2946 nt):
ATGCCGGCTGAGCTGCTGCTGCTGCTGATTGTTGCCTTCGCCAGCCCCAGCTGCCAGGTGCTCTCATCAC TGCGCATGGCTGCAATCCTGGATGATCAGACAGTGTGTGGCCGCGGTGAGCGTCTGGCCTTGGCCTTGGC CCGGGAGCAGATCAACGGGATCATCGAGGTCCCAGCCAAGGCCCGAGTGGAAGTAGACATCTTTGAGCTG CAGCGGGACAGCCAGTACGAGACCACGGACACCATGTGTCAGATCTTACCCAAAGGGGTTGTGTCTGTCC TTGGGCCCTCCTCTAGCCCAGCATCTGCCTCCACCGTGAGCCATATCTGTGGAGAGAAGGAGATCCCCCA CATCAAGGTGGGTCCCGAGGAGACACCCCGCCTTCAGTACCTTCGCTTCGCGTCTGTCAGCCTGTACCCC AGTAACGAGGACGTCAGCTTGGCGGTCTCCCGAATCCTCAAGTCCTTCAACTACCCCTCGGCCAGCCTCA TCTGCGCCAAGGCTGAGTGCCTGCTGCGATTGGAGGAACTGGTGCGTGGCTTCCTCATCTCCAAGGAGAC GCTGTCAGTGAGGATGTTGGACGACAGCCGGGACCCCACACCACTGCTCAAGGAGATCCGTGATGACAAG GTGTCCACCATCATCATCGACGCCAACGCCTCCATCTCCCACCTCATCCTCCGTAAGGCCTCGGAACTGG GAATGACCTCAGCGTTTTACAAGTACATCCTCACCACCATGGACTTCCCCATCCTGCATCTGGACGGTAT TGTGGAGGACTCCTCCAACATCCTGGGCTTCTCCATGTTCAACACGTCCCACCCCTTCTACCCTGAGTTT GTCCGCAGCCTCAACATGTCCTGGAGGGAGAACTGTGAAGCCAGCACCTACCTGGGCCCTGCGCTGTCAG CCGCCCTGATGTTTGACGCCGTGCACGTGGTGGTGAGCGCTGTCCGAGAGCTGAACCGCAGCCAGGAGAT CGGTGTGAAGCCTCTGGCCTGTACATCGGCCAACATTTGGCCCCACGGGACCAGCCTCATGAACTACCTG CGCATGGTAGAGTATGATGGGCTGACCGGGCGGGTCGAGTTCAACAGCAAAGGGCAGAGAACCAACTACA CCCTGCGCATCCTAGAAAAGTCCCGGCAGGGCCACCGTGAGATTGGGGTGTGGTACTCTAACCGCACCCT GGCCATGAATGCCACCACCCTGGACATCAACCTGTCGCAGACACTGGCCAACAAGACCCTGGTGGTCACA ACCATCCTGGAGAACCCATACGTCATGCGCCGGCCCAACTTCCAGGCCCTGTCGGGGAACGAACGCTTCG AGGGCTTCTGCGTGGACATGCTGCGGGAGCTGGCCGAGCTGCTGCGCTTCCGCTACCGCCTGCGGTTGGT GGAGGATGGGCTGTACGGGGCGCCCGAGCCCAACGGCTCCTGGACGGGCATGGTTGGCGAGCTCATCAAC CGGAAGGCAGACCTGGCTGTGGCCGCCTTCACCATCACAGCTGAGCGGGAGAAGGTCATCGACTTTTCCA AGCCCTTTATGACCCTGGGGATCAGCATCCTCTACCGAGTGCACATGGGCCGCAAGCCTGGCTACTTCTC CTTCCTGGACCCCTTCTCCCCTGCTGTGTGGCTCTTCATGCTTCTTGCCTACCTGGCTGTCAGCTGCGTC CTGTTTCTGGCTGCCAGGCTGAGCCCCTATGAGTGGTATAACCCACACCCATGCCTGCGGGCACGCCCCC ACATCCTGGAGAACCAGTACACGCTGGGCAACAGCCTGTGGTTTCCCGTGGGGGGCTTCATGCAGCAGGG CTCGGAGATCATGCCCCGGGCGCTGTCCACGCGCTGTGTCAGCGGAGTCTGGTGGGCCTTCACCTTGATC ATCATCTCCTCCTACACGGCCAACCTGGCCGCCTTCCTCACCGTGCAGCGCATGGAGGTGCCTGTGGAGT CGGCCGATGACCTGGCAGATCAGACCAACATCGAGTATGGCACCATCCACGCCGGCTCCACCATGACCTT CTTCCAGAATTCACGGTACCAAACGTACCAGCGCATGTGGAACTACATGCAGTCGAAGCAGCCCAGCGTG TTCGTCAAGAGCACAGAAGAGGGCATTGCCCGCGTCCTCAACTCCCGCTACGCCTTCCTGCTCGAGTCCA CCATGAACGAATACCACCGGCGCCTCAACTGCAACCTCACCCAGATCGGGGGACTCCTCGACACCAAGGG CTACGGCATTGGCATGCCGCTGGGCTCCCCGTTCCGGGATGAGATCACACTGGCCATCCTGCAGCTTCAG GAGAACAACCGGCTGGAGATCCTGAAGCGCAAGTGGTGGGAGGGGGGCCGGTGCCCCAAGGAGGAGGACC ATCGAGCTAAAGGTTTGGGCATGGAGAACATTGGTGGCATTTTTATCGTGCTCATCTGTGGCCTCATCAT TGCTGTCTTCGTGGCGGTCATGGAATTCATATGGTCCACACGGAGGTCAGCTGAGTCCGAGGAGACCCCA GCTCTGCATCCAGCTGCCTGCCAGTGTTCTGCACTTGGCCCAAGGACTCCTCTGAAGGAGCCGTCCATGC TGCTAGTAAAGGTGCCCTCCACCCGTGTCCAGGTTGCCTTCTCAAGGACATCCCTCCGGCAAGTCTGTCC TTTCCTCCTGCAGCATCAGTTGTCCTCTCTTTATTGGATTCAGGCCACCAACGTACAAATATGCTGTCAT TTCTCCAGTCTTAAACCCTCTCCTGACCTCACTTTCCCTCCCAGCCACCGCCCACTTTCTTCCCTTCTCT TTACAGCCTTGGCAGCAGTGGGGGGTCTCCCTGATGCTTCCAGTTTCTTCTTTCCTCCCATTTCCTCTTG CCCCCCACTCCAGTCTGGCATCGGTCCCTGCCACTCCACTGAAGCCACTCTTGTCACCAGCAACTTCCAT GTCTGA
Translation (981 aa):
MPAELLLLLIVAFASPSCQVLSSLRMAAILDDQTVCGRGERLALALAREQINGIIEVPAKARVEVDIFEL QRDSQYETTDTMCQILPKGVVSVLGPSSSPASASTVSHICGEKEIPHIKVGPEETPRLQYLRFASVSLYP SNEDVSLAVSRILKSFNYPSASLICAKAECLLRLEELVRGFLISKETLSVRMLDDSRDPTPLLKEIRDDK VSTIIIDANASISHLILRKASELGMTSAFYKYILTTMDFPILHLDGIVEDSSNILGFSMFNTSHPFYPEF VRSLNMSWRENCEASTYLGPALSAALMFDAVHVVVSAVRELNRSQEIGVKPLACTSANIWPHGTSLMNYL RMVEYDGLTGRVEFNSKGQRTNYTLRILEKSRQGHREIGVWYSNRTLAMNATTLDINLSQTLANKTLVVT TILENPYVMRRPNFQALSGNERFEGFCVDMLRELAELLRFRYRLRLVEDGLYGAPEPNGSWTGMVGELIN RKADLAVAAFTITAEREKVIDFSKPFMTLGISILYRVHMGRKPGYFSFLDPFSPAVWLFMLLAYLAVSCV LFLAARLSPYEWYNPHPCLRARPHILENQYTLGNSLWFPVGGFMQQGSEIMPRALSTRCVSGVWWAFTLI IISSYTANLAAFLTVQRMEVPVESADDLADQTNIEYGTIHAGSTMTFFQNSRYQTYQRMWNYMQSKQPSV FVKSTEEGIARVLNSRYAFLLESTMNEYHRRLNCNLTQIGGLLDTKGYGIGMPLGSPFRDEITLAILQLQ ENNRLEILKRKWWEGGRCPKEEDHRAKGLGMENIGGIFIVLICGLIIAVFVAVMEFIWSTRRSAESEETP ALHPAACQCSALGPRTPLKEPSMLLVKVPSTRVQVAFSRTSLRQVCPFLLQHQLSSLYWIQATNVQICCH FSSLKPSPDLTFPPSHRPLSSLLFTALAAVGGLPDASSFFFPPISSCPPLQSGIGPCHSTEATLVTSNFH V

	Links Key
	Links to:	History report BLAST report Entrez Gene Nucleotide report Protein report
	Re-query CCDS DB by:	CCDS ID Gene ID Nucleotide ID Protein ID
	Genome Browser Links:	Ensembl Genome Browser NCBI Sequence Viewer UCSC Genome Browser VEGA Genome Browser

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