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Report for CCDS35184.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
35184.1 Public Homo sapiens 9 LRRC26 24 110 108 CCDS HistoryNCBI Gene:389816Re-query CCDS DB by CCDS ID:35184.1See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 35184.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000371542.3 ENSP00000360597.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000371542.3Link to Ensembl Protein Viewer:ENSP00000360597.3Re-query CCDS DB by Nucleotide ID:ENST00000371542Re-query CCDS DB by Protein ID:ENSP00000360597
Original member Current member NCBI NM_001013653.3 NP_001013675.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001013653.3Link to Protein Sequence:NP_001013675.1Re-query CCDS DB by Nucleotide ID:NM_001013653Re-query CCDS DB by Protein ID:NP_001013675Link to BLAST:NP_001013675.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001013675.1 334 Q2I0M4-1 334 100% 0 0

Chromosomal Locations for CCDS 35184.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 137168854 137169185 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 137169271 137169943 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1005 nt):
ATGCGGGGCCCTTCCTGGTCGCGGCCTCGGCCGCTGCTGCTGCTGTTGCTGCTGCTGTCGCCTTGGCCTG
TCTGGGCCCAGGTGTCGGCCACGGCCTCGCCCTCGGGGTCCCTGGGCGCCCCGGACTGCCCCGAGGTGTG
CACGTGCGTGCCGGGAGGCCTGGCCAGCTGCTCGGCACTCTCGCTGCCCGCCGTGCCCCCGGGCCTGAGC
CTGCGCCTGCGCGCGCTGCTGCTGGACCACAACCGCGTCCGTGCGCTGCCGCCAGGTGCCTTCGCGGGAG
CGGGCGCGCTACAGCGCCTGGACCTGCGCGAGAACGGGCTGCACTCGGTGCATGTGCGAGCCTTCTGGGG
CCTGGGCGCGCTGCAGCTGCTGGACCTGAGCGCCAACCAGCTGGAAGCACTGGCACCAGGGACTTTCGCG
CCGCTGCGCGCGCTGCGCAACCTCTCATTGGCCGGCAACCGGCTGGCGCGCCTGGAGCCCGCGGCGCTAG
GCGCGCTCCCGCTGCTGCGCTCACTCAGCCTGCAGGACAACGAGCTGGCGGCACTCGCGCCGGGGCTGCT
GGGCCGCCTGCCCGCTCTAGACGCGCTGCACCTGCGCGGCAACCCTTGGGGCTGCGGGTGCGCGCTGCGC
CCGCTCTGCGCCTGGCTGCGCCGGCACCCGCTGCCCGCGTCAGAGGCCGAGACGGTGCTCTGCGTGTGGC
CGGGACGCCTGACGCTCAGCCCCCTGACTGCCTTTTCCGACGCCGCCTTTAGCCATTGCGCGCAGCCGCT
CGCCCTGCGGGACCTGGCCGTGGTTTACACGCTCGGGCCGGCCTCCTTCCTCGTCAGCCTGGCTTCCTGC
CTGGCGCTGGGCTCTGGGCTCACCGCCTGCCGTGCGCGCCGCCGCCGCCTCCGCACCGCCGCCCTCCGCC
CGCCGAGACCGCCAGACCCGAACCCCGATCCCGACCCCCACGGCTGTGCCTCGCCCGCGGACCCGGGGAG
CCCCGCCGCTGCCGCCCAAGCCTGA

Translation (334 aa):
MRGPSWSRPRPLLLLLLLLSPWPVWAQVSATASPSGSLGAPDCPEVCTCVPGGLASCSALSLPAVPPGLS
LRLRALLLDHNRVRALPPGAFAGAGALQRLDLRENGLHSVHVRAFWGLGALQLLDLSANQLEALAPGTFA
PLRALRNLSLAGNRLARLEPAALGALPLLRSLSLQDNELAALAPGLLGRLPALDALHLRGNPWGCGCALR
PLCAWLRRHPLPASEAETVLCVWPGRLTLSPLTAFSDAAFSHCAQPLALRDLAVVYTLGPASFLVSLASC
LALGSGLTACRARRRRLRTAALRPPRPPDPNPDPDPHGCASPADPGSPAAAAQA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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