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Report for CCDS46009.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
46009.1 Public Homo sapiens 19 HAUS8 24 110 108 CCDS HistoryNCBI Gene:93323Re-query CCDS DB by CCDS ID:46009.1Re-query CCDS DB by GeneID:93323See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 46009.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000448593.6 ENSP00000395298.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000448593.6Link to Ensembl Protein Viewer:ENSP00000395298.1Re-query CCDS DB by Nucleotide ID:ENST00000448593Re-query CCDS DB by Protein ID:ENSP00000395298
Original member Current member NCBI NM_001011699.1 NP_001011699.1 Accepted alive Link to Nucleotide Sequence:NM_001011699.1Link to Protein Sequence:NP_001011699.1Re-query CCDS DB by Nucleotide ID:NM_001011699Re-query CCDS DB by Protein ID:NP_001011699Link to BLAST:NP_001011699.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001011699.1 409 Q9BT25-3 409 100% 0 0

Chromosomal Locations for CCDS 46009.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 17049873 17050176 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 17052825 17052966 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 17055861 17056002 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 17058549 17058707 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 17058811 17058876 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 17059557 17059651 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 17059997 17060089 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 17062698 17062779 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 17069031 17069086 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 17073274 17073335 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 17075394 17075422 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1230 nt):
ATGGCGGATTCCTCGGGGCGAGGCGCTGGGAAGCCTGCAACCGGCCCCACAAATTCTAGCAGTGCCAAGA
AGAAGGATAAAAGAGTTCAAGGTGGAAGAGTGATTGAGTCCCGGTATCTGCAGTATGAAAAGAAGACAAC
CCAAAAGGCTCCTGCAGGAGATGGGTCACAGACCCGAGGGAAGATGTCTGAAGGTGGAAGGAAATCCAGC
CTGCTCCAGAAAAGCAAAGATAGCAGTGGGGTCGGAAAGGGTGACCTGCAGTCCACGTTGCTGGAAGGGC
ATGGCACAGCTCCACCTGACCTGGATCTCTCTGCTATTAATGACAAAAGCATCGTCAAAAAGACGCCACA
GTTAGCAAAAACAATATCAAAGAAACCTGAGTCAACATCATTTTCTGCCCCTCGGAAAAAGAGCCCGGAT
TTATCTGAAGCAATGGAAATGATGGAGTCTCAGACACTACTGCTGACGCTACTATCCGTAAAGATGGAGA
ACAATCTTGCTGAGTTTGAAAGAAGGGCAGAAAAGAATTTATTAATAATGTGTAAGGAGAAGGAGAAGCT
ACAGAAAAAGGCCCACGAGCTGAAGCGCAGGCTTCTCCTCTCTCAGAGGAAGCGGGAGCTGGCAGATGTC
CTGGATGCCCAGATCGAGATGCTCAGCCCCTTCGAGGCAGTGGCCACACGCTTCAAGGAGCAATACAGGA
CATTCGCCACGGCCCTGGACACTACCAGGCACGAGCTGCCCGTGAGGTCCATCCACCTGGAGGGAGATGG
GCAGCAGCTCTTAGACGCCCTGCAGCATGAACTGGTGACCACTCAGCGCCTCCTGGGAGAACTTGATGTT
GGTGATTCGGAAGAAAATGTGCAGGTGCTGGACTTACTGAGCGAACTCAAGGACGTGACGGCGAAAAAGG
ACCTTGAGCTCCGAAGGAGCTTTGCCCAGGTGCTGGAACTCTCCGCAGAGGCAAGCAAAGAGGCAGCCTT
GGCAAACCAGGAAGTCTGGGAAGAGACCCAGGGCATGGCGCCCCCCAGCCGGTGGTATTTCAATCAAGAC
AGTGCCTGCAGAGAATCTGGGGGAGCACCCAAGAACACGCCCCTGTCTGAGGACGACAACCCGGGTGCCT
CGTCAGCCCCCGCTCAGGCCACGTTCATCAGCCCAAGCGAAGATTTTTCTTCAAGCAGCCAGGCAGAAGT
CCCGCCCTCTCTCTCTCGTTCAGGGAGGGACTTGTCATGA

Translation (409 aa):
MADSSGRGAGKPATGPTNSSSAKKKDKRVQGGRVIESRYLQYEKKTTQKAPAGDGSQTRGKMSEGGRKSS
LLQKSKDSSGVGKGDLQSTLLEGHGTAPPDLDLSAINDKSIVKKTPQLAKTISKKPESTSFSAPRKKSPD
LSEAMEMMESQTLLLTLLSVKMENNLAEFERRAEKNLLIMCKEKEKLQKKAHELKRRLLLSQRKRELADV
LDAQIEMLSPFEAVATRFKEQYRTFATALDTTRHELPVRSIHLEGDGQQLLDALQHELVTTQRLLGELDV
GDSEENVQVLDLLSELKDVTAKKDLELRRSFAQVLELSAEASKEAALANQEVWEETQGMAPPSRWYFNQD
SACRESGGAPKNTPLSEDDNPGASSAPAQATFISPSEDFSSSSQAEVPPSLSRSGRDLS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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