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Report for CCDS7034.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
7034.1 Public Homo sapiens 9 SSNA1 24 110 108 CCDS HistoryNCBI Gene:8636Re-query CCDS DB by CCDS ID:7034.1See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 7034.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000322310.10 ENSP00000313752.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000322310.10Link to Ensembl Protein Viewer:ENSP00000313752.5Re-query CCDS DB by Nucleotide ID:ENST00000322310Re-query CCDS DB by Protein ID:ENSP00000313752
Original member Current member NCBI NM_003731.3 NP_003722.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_003731.3Link to Protein Sequence:NP_003722.2Re-query CCDS DB by Nucleotide ID:NM_003731Re-query CCDS DB by Protein ID:NP_003722Link to BLAST:NP_003722.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_003722.2 119 O43805 119 100% 0 0

Chromosomal Locations for CCDS 7034.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 137188727 137188778 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 137189066 137189265 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 137189807 137189914 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (360 nt):
ATGACCCAGCAGGGCGCGGCGCTGCAGAACTACAACAACGAGCTGGTCAAGTGCATAGAGGAGCTGTGCC
AGAAGCGGGAGGAGCTGTGCCGGCAGATCCAGGAGGAGGAGGACGAGAAGCAGCGGCTGCAGAATGAGGT
GAGGCAGCTGACAGAGAAGCTGGCCCGCGTCAACGAGAACCTGGCACGCAAGATTGCCTCTCGCAACGAG
TTCGACCGGACCATCGCGGAGACGGAGGCCGCCTACCTCAAGATCCTGGAGAGCTCCCAGACTTTGCTCA
GCGTTCTCAAGAGGGAAGCTGGGAACCTGACCAAGGCTACAGCCCCAGACCAGAAAAGTAGCGGCGGCAG
GGACAGCTGA

Translation (119 aa):
MTQQGAALQNYNNELVKCIEELCQKREELCRQIQEEEDEKQRLQNEVRQLTEKLARVNENLARKIASRNE
FDRTIAETEAAYLKILESSQTLLSVLKREAGNLTKATAPDQKSSGGRDS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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