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Report for CCDS10525.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
10525.1 Public Homo sapiens 16 UBN1 24 110 108 CCDS HistoryNCBI Gene:29855Re-query CCDS DB by CCDS ID:10525.1Re-query CCDS DB by GeneID:29855See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 10525.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000262376.11 ENSP00000262376.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000262376.11Link to Ensembl Protein Viewer:ENSP00000262376.5Re-query CCDS DB by Nucleotide ID:ENST00000262376Re-query CCDS DB by Protein ID:ENSP00000262376
Original member Current member EBI ENST00000396658.8 ENSP00000379894.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000396658.8Link to Ensembl Protein Viewer:ENSP00000379894.3Re-query CCDS DB by Nucleotide ID:ENST00000396658Re-query CCDS DB by Protein ID:ENSP00000379894
Original member Current member NCBI NM_001079514.3 NP_001072982.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001079514.3Link to Protein Sequence:NP_001072982.1Re-query CCDS DB by Nucleotide ID:NM_001079514Re-query CCDS DB by Protein ID:NP_001072982Link to BLAST:NP_001072982.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001072982.1 1134 Q9NPG3-1 1134 100% 0 0

Chromosomal Locations for CCDS 10525.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 4852918 4853166 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 4857990 4858076 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 4858568 4858663 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 4859025 4859159 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 4859865 4859968 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 4860664 4861102 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 4868833 4868903 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 4870212 4870341 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 4870516 4870634 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 4870844 4870972 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 4871155 4871301 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 4872884 4872934 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 4873031 4873073 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 4874211 4875434 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 4876871 4877111 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 4877385 4877474 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 4880083 4880132 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3405 nt):
ATGTCGGAGCCCCACAGGGTCCAGTTCACCTCTCTCCCAGGTTCCCTGAATCCTGCGTTTTTGAAGAAGT
CCCGGAAGGAGGAGGCTGGGGCAGGAGAACAGCATCAGGACTGTGAGCCGGCTGCAGCAGCTGTTCGGAT
TACACTCACCCTCTTTGAACCAGATCACAAACGCTGCCCAGAGTTCTTCTACCCAGAGCTGGTGAAGAAT
ATCCGAGGGAAGGTAAAAGGCCTTCAGCCTGGAGATAAGAAGAAAGATCTGTCAGATCCTTTCAATGACG
AAGAAAAGGAAAGGCATAAAGTAGAGGCCCTTGCCCGAAAATTTGAAGAAAAATACGGTGGAAAGAAACG
TAGAAAAGACCGAATACAGGACTTGATCGATATGGGGTATGGTTATGATGAATCCGACTCCTTCATCGAT
AACTCTGAGGCGTATGATGAGCTTGTTCCTGCTTCTTTGACTACGAAGTATGGAGGATTTTACATTAACT
CGGGAACCCTGCAGTTTAGACAAGCATCAGAGTCTGAAGATGACTTCATTAAAGAAAAGAAGAAAAAATC
TCCAAAGAAGCGGAAGTTGAAGGAAGGTGGTGAGAAGATAAAGAAGAAGAAAAAAGATGACACTTATGAC
AAGGAGAAGAAATCGAAAAAGTCCAAGTTTTCCAAAGCCGGCTTCACAGCCCTCAATGCCAGTAAGGAGA
AGAAGAAGAAGAAATATTCTGGGGCTTTAAGCGTTAAAGAGATGCTAAAGAAATTTCAGAAAGAGAAAGA
GGCTCAGAAAAAAAGGGAGGAGGAGCATAAGCCTGTTGCGGTCCCATCAGCGGAAGCTCAGGGCCTGCGG
GAACTGGAGGGTGCCTCTGACCCCTTGCTCTCACTCTTTGGCTCTACTTCTGACAACGACTTGCTCCAGG
CGGCCACTGCCATGGACTCGCTGACGGATTTGGACTTGGAGCATCTGCTCAGTGAGTCTCCAGAAGGAAG
TCCCTTCCGAGATATGGATGATGGAAGTGATTCCCTTGGGGTGGGATTGGACCAGGAATTCAGGCAGCCC
TCTTCTCTCCCCGAAGGCCTGCCAGCACCCCTGGAGAAGCGCGTTAAGGAGCTGGCTCAGGCTGCCAGAG
CTGCTGAGGGGGAGAGCAGACAGAAGTTCTTCACCCAGGATATTAATGGAATCCTATTAGACATAGAGGC
GCAGACTCGGGAGCTGAGCAGTCAGGTCCGCTCTGGGGTGTATGCCTATCTTGCGTCATTCCTGCCCTGC
AGCAAGGATGCCCTGCTCAAGCGTGCTCGGAAACTTCACCTCTATGAACAGGGGGGCCGTCTGAAGGAGC
CTCTCCAGAAGCTCAAGGAAGCCATTGGCAGGGCGATGCCAGAGCAGATGGCCAAGTACCAGGACGAATG
CCAGGCACACACGCAGGCAAAGGTTGCCAAGATGCTGGAAGAGGAGAAAGACAAGGAGCAGAGGGACCGG
ATTTGTTCGGATGAGGAAGAAGATGAAGAAAAAGGGGGCAGGAGGATAATGGGACCTCGGAAGAAGTTCC
AATGGAATGATGAGATCAGGGAGCTACTGTGCCAGGTGGTGAAGATCAAACTGGAGAGCCAGGACCTGGA
GAGGAACAACAAAGCCCAGGCTTGGGAGGACTGTGTGAAGGGCTTTCTGGATGCGGAAGTCAAGCCCCTC
TGGCCCAAAGGCTGGATGCAGGCCAGAACTCTGTTTAAGGAGAGCAGACGAGGCCATGGGCACCTGACTT
CAATCCTGGCCAAGAAGAAAGTTATGGCCCCTTCTAAAATCAAGGTGAAGGAATCGTCTACGAAGCCTGA
TAAAAAGGTTTCTGTCCCATCAGGACAGATTGGTGGCCCCATTGCTTTGCCCTCAGATCACCAAACAGGA
GGCCTGAGTATTGGGGCCTCGAGCAGGGAGCTCCCATCCCAGGCATCGGGCGGCCTTGCTAACCCTCCTC
CTGTCAACCTGGAGGACTCATTGGATGAAGACTTGATCCGCAATCCAGCCTCCTCGGTGGAAGCCGTGTC
CAAGGAATTGGCTGCATTGAATAGCAGAGCAGCTGGGAACTCTGAATTCACACTGCCTGCACCCTCAAAA
GCACCTGCAGAAAAAGTTGGAGGCGTTTTATGTACAGAAGAAAAAAGGAACTTTGCGAAGCCTAGTCCTT
CTGCTCCACCACCAGCTAGCTCTCTGCAGTCACCCCTCAATTTTCTGGCAGAACAGGCTCTGGCACTGGG
GCAGTCCTCTCAGGAGAAAAAACCAGAGAGTTCTGGCTACAAAGAGCTGTCCTGCCAGGCTCCCCTCAAT
AAGGGCCTGCCAGAAGTACATCAGTCCAAAGCTAAGCACCACAGCTTGCCACGGACGTCTCACGGGCCCC
AAGTGGCAGTTCCTGTGCCTGGCCCCCAGGTCAAAGTCTTTCATGCCGGCACTCAGCAGCAGAAAAACTT
CACGCCCCCATCTCCATTTGCCAATAAGCTCCAAGGCCCAAAGGCTTCTCCCACACAGTGTCATCGTTCC
CTCCTGCAGTTAGTGAAGACAGCGGCCAAAGGCCAGGGCTTCCATCCCTCTGCACCAGCCACCTCAGGAG
GCCTGTCAGCCTCCAGCAGCAGCTCTCACAAGACCCCAGCCTCGTCCTCTTCTGCCCTGAGCCATCCAGC
AAAGCCACATTCAGTCAGCTCTGCAGGCTCATCTTACAAGAATAATCCCTTTGCCAGCTCAATCTCCAAA
CATGGGGTTTCTTCTGGCAGCTCTTCCTCGGGAGGAACACCAGTCCAGAGTTCTGTTTCTGGGAGCCTGG
TCCCTGGCATACAGCCTCCCTCCGTGGGACAGGCCACCAGCCGACCCGTCCCAAGTTCAGCAGGGAAAAA
AATGCCTGTTTCCCAGAAGTTGACTCTGGTAGCCCCTCCAGGCGGTCCAAACGGAGATTCCAGTGGTGGG
ACCCAGGGAGTGGCAAAGTTGCTGACCTCGCCGTCCCTAAAGCCCTCTGCAGTTAGTAGTGTGACATCGT
CTACCTCCTTGTCAAAAGGAGCGAGTGGGACTGTGCTGCTGGCCGGCTCCTCTTTGATGGCTTCACCCTA
CAAATCCAGCAGCCCAAAGCTGTCTGGGGCCATGAGCTCGAACTCCTTGGGAATTATAACCCCTGTCCCT
ATTCCTGTCCATGTGCTCTCCTTCAGCGCTGACTCCTCTGCCAAAGCAGGGGTCTCCAAGGATGCCATCG
TCACAGGCCCTGCCCCCGGGTCCTTCCACCATGGCCTTGGCCACAGTCTTCTGGCTGGCTTGCACTCCAG
CCCGCCCCATGCAGCGCCTCTCCCACACGCTGCGGTGCCCACCCATATCCCGCAGAGTCTGCCAGGTGCT
TCTCAGCTTCACGGGAAAGGGCCTGCTGTACCACGGAAATTGTGA

Translation (1134 aa):
MSEPHRVQFTSLPGSLNPAFLKKSRKEEAGAGEQHQDCEPAAAAVRITLTLFEPDHKRCPEFFYPELVKN
IRGKVKGLQPGDKKKDLSDPFNDEEKERHKVEALARKFEEKYGGKKRRKDRIQDLIDMGYGYDESDSFID
NSEAYDELVPASLTTKYGGFYINSGTLQFRQASESEDDFIKEKKKKSPKKRKLKEGGEKIKKKKKDDTYD
KEKKSKKSKFSKAGFTALNASKEKKKKKYSGALSVKEMLKKFQKEKEAQKKREEEHKPVAVPSAEAQGLR
ELEGASDPLLSLFGSTSDNDLLQAATAMDSLTDLDLEHLLSESPEGSPFRDMDDGSDSLGVGLDQEFRQP
SSLPEGLPAPLEKRVKELAQAARAAEGESRQKFFTQDINGILLDIEAQTRELSSQVRSGVYAYLASFLPC
SKDALLKRARKLHLYEQGGRLKEPLQKLKEAIGRAMPEQMAKYQDECQAHTQAKVAKMLEEEKDKEQRDR
ICSDEEEDEEKGGRRIMGPRKKFQWNDEIRELLCQVVKIKLESQDLERNNKAQAWEDCVKGFLDAEVKPL
WPKGWMQARTLFKESRRGHGHLTSILAKKKVMAPSKIKVKESSTKPDKKVSVPSGQIGGPIALPSDHQTG
GLSIGASSRELPSQASGGLANPPPVNLEDSLDEDLIRNPASSVEAVSKELAALNSRAAGNSEFTLPAPSK
APAEKVGGVLCTEEKRNFAKPSPSAPPPASSLQSPLNFLAEQALALGQSSQEKKPESSGYKELSCQAPLN
KGLPEVHQSKAKHHSLPRTSHGPQVAVPVPGPQVKVFHAGTQQQKNFTPPSPFANKLQGPKASPTQCHRS
LLQLVKTAAKGQGFHPSAPATSGGLSASSSSSHKTPASSSSALSHPAKPHSVSSAGSSYKNNPFASSISK
HGVSSGSSSSGGTPVQSSVSGSLVPGIQPPSVGQATSRPVPSSAGKKMPVSQKLTLVAPPGGPNGDSSGG
TQGVAKLLTSPSLKPSAVSSVTSSTSLSKGASGTVLLAGSSLMASPYKSSSPKLSGAMSSNSLGIITPVP
IPVHVLSFSADSSAKAGVSKDAIVTGPAPGSFHHGLGHSLLAGLHSSPPHAAPLPHAAVPTHIPQSLPGA
SQLHGKGPAVPRKL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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