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Report for CCDS3117.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
3117.1 Public Homo sapiens 3 RASA2 24 110 108 CCDS HistoryNCBI Gene:5922Re-query CCDS DB by CCDS ID:3117.1Re-query CCDS DB by GeneID:5922See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 3117.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000286364.9 ENSP00000286364.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000286364.9Link to Ensembl Protein Viewer:ENSP00000286364.3Re-query CCDS DB by Nucleotide ID:ENST00000286364Re-query CCDS DB by Protein ID:ENSP00000286364
Original member Current member NCBI NM_006506.5 NP_006497.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_006506.5Link to Protein Sequence:NP_006497.2Re-query CCDS DB by Nucleotide ID:NM_006506Re-query CCDS DB by Protein ID:NP_006497Link to BLAST:NP_006497.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_006497.2 849 Q15283-2 849 100% 0 0

Chromosomal Locations for CCDS 3117.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 141487084 141487216 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 141512163 141512280 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 141516328 141516431 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 141529708 141529802 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 141540533 141540609 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 141553857 141553940 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 141555840 141555912 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 141558886 141558962 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 141559894 141559995 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 141570912 141571068 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 141571406 141571554 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 141572609 141572723 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 141573147 141573221 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 141573944 141574067 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 141577000 141577106 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 141580368 141580451 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 141581100 141581177 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 141586025 141586098 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 141586646 141586752 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 141607678 141607760 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 141608489 141608697 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 141609420 141609523 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 141609877 141610066 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 141612283 141612313 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2550 nt):
ATGGCGGCGGCGGCGCCTGCTGCTGCGGCGGCTTCTTCCGAGGCGCCAGCGGCGAGTGCGACTGCAGAGC
CCGAGGCCGGGGACCAGGACAGTCGCGAGGTTCGAGTGTTGCAGAGCCTGCGGGGCAAGATCTGTGAAGC
AAAAAATTTATTGCCATATCTTGGACCCCACAAAATGAGAGATTGTTTCTGTACCATAAATTTGGACCAG
GAAGAAGTTTATCGTACCCAAGTTGTGGAAAAATCTTTAAGCCCATTTTTCAGTGAAGAATTTTACTTTG
AGATTCCAAGAACTTTCCAGTATTTGTCTTTCTATGTTTATGATAAGAATGTTTTACAAAGAGATCTCCG
TATAGGAAAAGTAGCCATCAAAAAAGAAGACTTGTGTAATCACAGTGGCAAAGAAACTTGGTTTTCATTA
CAGCCTGTTGACTCCAATTCAGAGGTTCAGGGTAAAGTTCACCTTGAATTAAAACTGAATGAACTGATAA
CGGAGAATGGAACTGTATGCCAGCAGCTTGTTGTACACATCAAGGCATGCCATGGGTTGCCTCTCATAAA
TGGCCAAAGCTGTGACCCTTATGCAACAGTTTCTCTAGTGGGCCCTTCTAGGAATGACCAAAAGAAGACA
AAAGTAAAGAAGAAAACAAGCAATCCGCAGTTTAATGAAATCTTTTATTTTGAGGTAACCAGATCCAGTA
GTTACACCAGAAAGTCCCAGTTCCAGGTAGAAGAGGAGGACATTGAAAAGCTAGAAATCAGGATCGACTT
GTGGAACAATGGAAACCTAGTCCAAGATGTTTTCCTAGGTGAGATTAAGGTTCCTGTGAACGTATTAAGA
ACTGATTCCTCTCATCAAGCCTGGTACTTGCTACAGCCAAGAGACAATGGAAACAAGTCATCCAAAACTG
ATGACCTGGGGTCTCTTCGATTAAATATATGTTATACAGAAGACTACGTGCTTCCTTCAGAGTACTATGG
TCCTTTGAAAACTTTGCTGCTAAAATCACCAGATGTTCAACCAATATCTGCCTCAGCTGCTTACATTTTG
AGTGAAATATGTCGAGATAAAAATGATGCTGTTTTGCCCCTTGTACGACTGCTGCTGCACCATGATAAAC
TTGTTCCTTTTGCCACTGCTGTGGCTGAATTAGACTTGAAGGATACACAAGATGCAAACACAATTTTTAG
AGGAAATTCCCTGGCTACCCGATGTCTGGATGAGATGATGAAAATAGTGGGAGGGCACTACCTGAAAGTA
ACATTAAAACCTATTCTTGATGAGATATGTGACTCCTCAAAATCCTGTGAAATCGATCCTATTAAATTGA
AAGAGGGAGATAATGTAGAAAATAATAAGGAGAATCTGCGCTACTATGTAGACAAGTTATTCAATACAAT
TGTAAAATCAAGTATGAGCTGCCCCACTGTAATGTGTGATATCTTTTATTCTCTAAGGCAGATGGCTACT
CAGAGATTTCCTAATGACCCTCATGTTCAGTATTCTGCAGTGAGCAGCTTTGTATTTCTTCGTTTCTTTG
CTGTAGCCGTAGTATCACCTCATACTTTTCATTTGCGACCTCATCATCCAGATGCACAGACAATTAGAAC
ATTAACTCTCATCTCAAAAACTATACAAACTTTGGGAAGCTGGGGGAGTCTGTCCAAAAGCAAGTCAAGT
TTCAAAGAGACATTCATGTGTGAATTTTTCAAAATGTTTCAAGAAGAAGGATATATTATAGCAGTTAAAA
AGTTCTTGGATGAAATTTCATCTACTGAAACTAAAGAGTCCAGTGGTACGAGTGAGCCTGTGCACCTGAA
AGAAGGTGAGATGTATAAAAGAGCTCAAGGAAGAACTCGGATTGGAAAAAAGAATTTTAAGAAACGATGG
TTCTGCTTAACAAGCAGAGAGCTCACCTACCACAAACAGCCAGGCAAAGATGCAATCTACACAATCCCAG
TAAAAAACATTCTTGCTGTGGAAAAACTGGAAGAGAGCTCTTTCAACAAGAAAAATATGTTCCAAGTAAT
ACATACGGAGAAACCACTCTATGTCCAGGCAAATAACTGTGTAGAAGCTAATGAATGGATAGACGTACTC
TGCAGGGTGAGCCGATGCAATCAAAACAGGCTCAGTTTTTATCATCCCTCTGTGTATCTGAACGGAAATT
GGCTCTGCTGTCAGGAGACTGGTGAAAACACTCTCGGCTGCAAGCCATGTACTGCAGGTGTCCCTGCAGA
CATCCAAATAGATATTGATGAAGACAGAGAAACAGAAAGAATTTATTCCCTTTTTACCCTCAGTTTACTT
AAGCTGCAGAAGATGGAAGAGGCTTGTGGAACTATTGCAGTCTATCAAGGACCACAGAAAGAGCCTGATG
ATTATTCTAACTTTGTAATCGAGGATTCTGTAACAACCTTTAAGACAATTCAGCAAATAAAAAGCATAAT
TGAGAAGCTGGATGAACCTCATGAAAAATATAGGAAGAAAAGATCCAGTAGTGCAAAATATGGGAGCAAG
GAAAATCCAATTGTTGGGAAAGCATCTTAG

Translation (849 aa):
MAAAAPAAAAASSEAPAASATAEPEAGDQDSREVRVLQSLRGKICEAKNLLPYLGPHKMRDCFCTINLDQ
EEVYRTQVVEKSLSPFFSEEFYFEIPRTFQYLSFYVYDKNVLQRDLRIGKVAIKKEDLCNHSGKETWFSL
QPVDSNSEVQGKVHLELKLNELITENGTVCQQLVVHIKACHGLPLINGQSCDPYATVSLVGPSRNDQKKT
KVKKKTSNPQFNEIFYFEVTRSSSYTRKSQFQVEEEDIEKLEIRIDLWNNGNLVQDVFLGEIKVPVNVLR
TDSSHQAWYLLQPRDNGNKSSKTDDLGSLRLNICYTEDYVLPSEYYGPLKTLLLKSPDVQPISASAAYIL
SEICRDKNDAVLPLVRLLLHHDKLVPFATAVAELDLKDTQDANTIFRGNSLATRCLDEMMKIVGGHYLKV
TLKPILDEICDSSKSCEIDPIKLKEGDNVENNKENLRYYVDKLFNTIVKSSMSCPTVMCDIFYSLRQMAT
QRFPNDPHVQYSAVSSFVFLRFFAVAVVSPHTFHLRPHHPDAQTIRTLTLISKTIQTLGSWGSLSKSKSS
FKETFMCEFFKMFQEEGYIIAVKKFLDEISSTETKESSGTSEPVHLKEGEMYKRAQGRTRIGKKNFKKRW
FCLTSRELTYHKQPGKDAIYTIPVKNILAVEKLEESSFNKKNMFQVIHTEKPLYVQANNCVEANEWIDVL
CRVSRCNQNRLSFYHPSVYLNGNWLCCQETGENTLGCKPCTAGVPADIQIDIDEDRETERIYSLFTLSLL
KLQKMEEACGTIAVYQGPQKEPDDYSNFVIEDSVTTFKTIQQIKSIIEKLDEPHEKYRKKRSSSAKYGSK
ENPIVGKAS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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