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Report for CCDS59082.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
59082.1 Public Homo sapiens 7 CYREN 24 110 108 CCDS HistoryNCBI Gene:78996Re-query CCDS DB by CCDS ID:59082.1Re-query CCDS DB by GeneID:78996See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 11, NCBI annotation release 103, Ensembl annotation release 68

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 59082.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000424142.5 ENSP00000400024.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000424142.5Link to Ensembl Protein Viewer:ENSP00000400024.1Re-query CCDS DB by Nucleotide ID:ENST00000424142Re-query CCDS DB by Protein ID:ENSP00000400024
Original member Current member EBI ENST00000483029.2 ENSP00000473365.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000483029.2Link to Ensembl Protein Viewer:ENSP00000473365.1Re-query CCDS DB by Nucleotide ID:ENST00000483029Re-query CCDS DB by Protein ID:ENSP00000473365
Original member Current member EBI ENST00000620897.4 ENSP00000481014.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000620897.4Link to Ensembl Protein Viewer:ENSP00000481014.1Re-query CCDS DB by Nucleotide ID:ENST00000620897Re-query CCDS DB by Protein ID:ENSP00000481014
Original member Current member NCBI NM_001243754.2 NP_001230683.1 Accepted alive Link to Nucleotide Sequence:NM_001243754.2Link to Protein Sequence:NP_001230683.1Re-query CCDS DB by Nucleotide ID:NM_001243754Re-query CCDS DB by Protein ID:NP_001230683Link to BLAST:NP_001230683.1
Original member Current member NCBI NM_001243755.2 NP_001230684.1 Accepted alive Link to Nucleotide Sequence:NM_001243755.2Link to Protein Sequence:NP_001230684.1Re-query CCDS DB by Nucleotide ID:NM_001243755Re-query CCDS DB by Protein ID:NP_001230684Link to BLAST:NP_001230684.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001230683.1 102 Q9BWK5-3 102 100% 0 0
NP_001230684.1 102 Q9BWK5-3 102 100% 0 0

Chromosomal Locations for CCDS 59082.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 135166611 135166871 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 135167732 135167779 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (309 nt):
ATGAATGAGGCTGAGATAGTTGATGTTGCTCTGGGAATCCTGATTGAGAGCCGCAAACAGGAAAAGGCCT
GCGAGCAGCCGGCCCTGGCGGGGGCTGATAACCCAGAGCACTCCCCTCCCTGCTCCGTGTCGCCTCACAC
AAGTTCTGGGAGCAGCAGTGAGGAAGAGGACAGTGGGAAACAGGCACTGGCTCCAGGCCTCAGCCCTTCC
CAGAGGCCGGGGGGTTCCAGCTCTGCCTGTAGCAGGAGCCCTGAGGAGGAGGAGGAAGAGGATGTGCTGA
AATACGTCCGGGAGATCTTTTTCAGCTAG

Translation (102 aa):
MNEAEIVDVALGILIESRKQEKACEQPALAGADNPEHSPPCSVSPHTSSGSSSEEEDSGKQALAPGLSPS
QRPGGSSSACSRSPEEEEEEDVLKYVREIFFS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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