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Report for CCDS6342.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
6342.1 Public Homo sapiens 8 ZHX1 24 110 108 CCDS HistoryNCBI Gene:11244Re-query CCDS DB by CCDS ID:6342.1Re-query CCDS DB by GeneID:11244See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 6342.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000297857.3 ENSP00000297857.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000297857.3Link to Ensembl Protein Viewer:ENSP00000297857.2Re-query CCDS DB by Nucleotide ID:ENST00000297857Re-query CCDS DB by Protein ID:ENSP00000297857
Original member Current member EBI ENST00000395571.8 ENSP00000378938.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000395571.8Link to Ensembl Protein Viewer:ENSP00000378938.2Re-query CCDS DB by Nucleotide ID:ENST00000395571Re-query CCDS DB by Protein ID:ENSP00000378938
Original member Current member EBI ENST00000522655.5 ENSP00000428821.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000522655.5Link to Ensembl Protein Viewer:ENSP00000428821.1Re-query CCDS DB by Nucleotide ID:ENST00000522655Re-query CCDS DB by Protein ID:ENSP00000428821
Original member Current member NCBI NM_001017926.3 NP_001017926.1 Accepted alive Link to Nucleotide Sequence:NM_001017926.3Link to Protein Sequence:NP_001017926.1Re-query CCDS DB by Nucleotide ID:NM_001017926Re-query CCDS DB by Protein ID:NP_001017926Link to BLAST:NP_001017926.1
Original member Current member NCBI NM_007222.5 NP_009153.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_007222.5Link to Protein Sequence:NP_009153.3Re-query CCDS DB by Nucleotide ID:NM_007222Re-query CCDS DB by Protein ID:NP_009153Link to BLAST:NP_009153.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001017926.1 873 Q9UKY1-1 873 100% 0 0
NP_009153.3 873 Q9UKY1-1 873 100% 0 0

Chromosomal Locations for CCDS 6342.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 8 (NC_000008.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 123253325 123255946 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2622 nt):
ATGGCAAGCAGGCGAAAATCAACAACACCTTGCATGGTCCTTGCCAGTGAACAAGATCCAGACCTTGAGT
TGATATCAGATTTGGATGAAGGTCCTCCTGTGCTTACACCTGTAGAAAACACCAGAGCAGAGAGTATCTC
AAGTGATGAAGAGGTTCATGAATCTGTGGATTCAGACAATCAGCAAAATAAAAAAGTTGAAGGTGGATAT
GAATGTAAATATTGTACTTTTCAAACTCCAGATCTAAATATGTTTACTTTTCATGTGGATTCGGAACATC
CCAATGTAGTGCTAAATTCATCCTATGTTTGTGTCGAATGCAATTTTCTTACCAAAAGGTATGATGCACT
TTCTGAGCATAATCTGAAATATCACCCAGGAGAAGAGAATTTTAAGTTGACTATGGTGAAACGTAATAAC
CAGACAATCTTTGAACAAACAATAAATGATCTGACTTTTGATGGTAGTTTTGTTAAAGAGGAGAATGCAG
AGCAAGCAGAATCTACAGAAGTTTCTTCTTCGGGAATATCTATCAGTAAAACTCCTATCATGAAAATGAT
GAAAAATAAAGTGGAAAATAAACGGATTGCAGTTCATCATAACTCAGTTGAGGACGTTCCTGAAGAGAAA
GAGAATGAAATCAAACCAGACCGTGAAGAAATTGTAGAAAATCCAAGTTCTTCAGCTTCTGAATCTAATA
CAAGTACTTCCATTGTAAACAGAATACATCCAAGTACTGCCAGCACGGTAGTGACACCAGCAGCAGTTCT
TCCTGGATTGGCACAGGTGATAACTGCTGTATCTGCTCAGCAGAATTCTAATTTGATTCCCAAAGTCTTA
ATCCCTGTTAATAGCATTCCCACCTACAATGCTGCATTGGATAACAATCCCCTTTTACTTAACACCTACA
ACAAGTTCCCTTACCCAACAATGTCAGAAATTACAGTTCTTTCTGCTCAAGCAAAATATACAGAGGAACA
GATCAAGATATGGTTTTCAGCCCAACGTTTAAAACATGGTGTTAGTTGGACTCCCGAGGAAGTAGAGGAG
GCAAGAAGGAAACAATTCAATGGAACAGTGCATACTGTACCTCAGACCATAACTGTTATTCCTACACACA
TTTCCACAGGGAGTAATGGTTTACCATCTATTTTACAGACATGCCAAATAGTTGGTCAGCCTGGTCTGGT
CCTTACTCAAGTGGCTGGAACAAACACCTTGCCAGTTACAGCACCTATAGCCTTGACAGTGGCAGGCGTT
CCAAGTCAAAATAATATACAGAAAAGTCAGGTACCTGCTGCTCAGCCTACTGCAGAAACAAAGCCAGCAA
CAGCAGCAGTTCCAACTTCTCAAAGTGTCAAACATGAAACTGCATTGGTAAACCCTGATTCATTTGGCAT
TCGGGCAAAAAAGACAAAAGAGCAACTGGCAGAATTAAAAGTTAGCTACCTTAAAAATCAGTTTCCCCAT
GATTCAGAAATTATCAGACTTATGAAAATAACAGGCCTGACGAAAGGAGAGATTAAAAAATGGTTTAGTG
ACACAAGGTACAACCAGAGAAATTCAAAGAGTAATCAGTGCTTACATCTCAACAATGATTCCTCTACCAC
CATTATTATAGACTCCAGTGATGAAACCACGGAATCCCCAACTGTTGGTACTGCACAGCCTAAGCAATCC
TGGAATCCTTTTCCTGACTTTACTCCCCAAAAGTTTAAAGAGAAAACTGCAGAGCAGCTTCGTGTCCTTC
AGGCAAGTTTTCTCAACAGCTCTGTACTTACAGATGAAGAATTAAATAGGTTAAGGGCACAAACCAAACT
TACCAGAAGAGAAATCGATGCTTGGTTTACAGAGAAGAAGAAATCAAAAGCTTTAAAGGAAGAGAAAATG
GAAATAGATGAAAGTAATGCAGGTAGTTCCAAAGAAGAAGCTGGAGAAACTTCTCCTGCAGATGAATCTG
GTGCACCTAAGTCAGGGAGTACAGGCAAGATATGTAAAAAAACACCTGAGCAGCTGCACATGCTTAAGAG
TGCATTTGTCCGGACACAGTGGCCATCACCAGAAGAGTATGACAAGTTGGCCAAAGAAAGCGGGCTTGCT
AGAACAGACATAGTTAGTTGGTTTGGGGACACCCGTTATGCTTGGAAGAATGGAAACTTGAAATGGTACT
ACTACTATCAGAGCGCCAATTCAAGTAGTATGAATGGTCTGTCTTCCCTTAGGAAAAGAGGGAGAGGGAG
ACCCAAAGGACGGGGAAGAGGAAGACCGCGTGGGCGGCCTAGAGGAAGCAAAAGAATTAACAACTGGGAC
AGGGGACCATCACTCATAAAATTTAAAACTGGAACTGCAATACTTAAGGATTATTACCTGAAGCACAAGT
TTCTTAATGAGCAAGACCTTGATGAACTTGTTAACAAATCACATATGGGCTATGAGCAGGTCAGAGAGTG
GTTTGCAGAAAGACAGAGAAGATCAGAATTAGGTATAGAATTATTTGAGGAAAATGAGGAGGAAGATGAA
GTTATTGATGACCAGGAAGAGGATGAAGAAGAAACAGATGATAGTGACACTTGGGAACCTCCACGACATG
TGAAACGGAAGCTGTCTAAATCAGATGACTGA

Translation (873 aa):
MASRRKSTTPCMVLASEQDPDLELISDLDEGPPVLTPVENTRAESISSDEEVHESVDSDNQQNKKVEGGY
ECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPGEENFKLTMVKRNN
QTIFEQTINDLTFDGSFVKEENAEQAESTEVSSSGISISKTPIMKMMKNKVENKRIAVHHNSVEDVPEEK
ENEIKPDREEIVENPSSSASESNTSTSIVNRIHPSTASTVVTPAAVLPGLAQVITAVSAQQNSNLIPKVL
IPVNSIPTYNAALDNNPLLLNTYNKFPYPTMSEITVLSAQAKYTEEQIKIWFSAQRLKHGVSWTPEEVEE
ARRKQFNGTVHTVPQTITVIPTHISTGSNGLPSILQTCQIVGQPGLVLTQVAGTNTLPVTAPIALTVAGV
PSQNNIQKSQVPAAQPTAETKPATAAVPTSQSVKHETALVNPDSFGIRAKKTKEQLAELKVSYLKNQFPH
DSEIIRLMKITGLTKGEIKKWFSDTRYNQRNSKSNQCLHLNNDSSTTIIIDSSDETTESPTVGTAQPKQS
WNPFPDFTPQKFKEKTAEQLRVLQASFLNSSVLTDEELNRLRAQTKLTRREIDAWFTEKKKSKALKEEKM
EIDESNAGSSKEEAGETSPADESGAPKSGSTGKICKKTPEQLHMLKSAFVRTQWPSPEEYDKLAKESGLA
RTDIVSWFGDTRYAWKNGNLKWYYYYQSANSSSMNGLSSLRKRGRGRPKGRGRGRPRGRPRGSKRINNWD
RGPSLIKFKTGTAILKDYYLKHKFLNEQDLDELVNKSHMGYEQVREWFAERQRRSELGIELFEENEEEDE
VIDDQEEDEEETDDSDTWEPPRHVKRKLSKSDD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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