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Report for CCDS72824.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
72824.1 Public Homo sapiens 1 DIPK1A 24 110 108 CCDS HistoryNCBI Gene:388650Re-query CCDS DB by CCDS ID:72824.1Re-query CCDS DB by GeneID:388650See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 72824.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000616709.4 ENSP00000482718.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000616709.4Link to Ensembl Protein Viewer:ENSP00000482718.1Re-query CCDS DB by Nucleotide ID:ENST00000616709Re-query CCDS DB by Protein ID:ENSP00000482718
Original member Current member NCBI NM_001252270.2 NP_001239199.1 Accepted alive Link to Nucleotide Sequence:NM_001252270.2Link to Protein Sequence:NP_001239199.1Re-query CCDS DB by Nucleotide ID:NM_001252270Re-query CCDS DB by Protein ID:NP_001239199Link to BLAST:NP_001239199.1

Chromosomal Locations for CCDS 72824.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 92843383 92844195 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 92850848 92850955 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 92876296 92876430 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 92961376 92961429 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1110 nt):
ATGGCGAGGAGTCTCTGTCCGGGGGCCTGGCTAAGGAAACCCTATTACCTCCAGGCTCGCTTCTCATATG
TGCGGATGAAATATCTTTTCTTTTCCTGGTTAGTGGTTTTTGTTGGAAGCTGGATTATATATGTGCAGTA
TTCTACCTATACAGAATTATGCAGAGGAAAGGACTGTAAGAAAATAATATGTGACAAGTACAAGACTGGA
GTTATTGATGGGCCTGCATGTAACAGCCTTTGTGTTACAGAAACTCTTTACTTTGGAAAATGTTTATCCA
CCAAGCCCAACAATCAGGCAAAATTGGGTGACCAAGGAAACCTCTCTGAACTGGTTAATCTCATCTTGAC
GGTGGCTGATGGAGACAAAGATGGCCAGGTTTCCTTGGGAGAAGCAAAGTCGGCATGGGCACTTCTTCAA
CTGAATGAATTTCTTCTCATGGTGATACTTCAAGATAAAGAACATACCCCCAAATTAATGGGATTCTGTG
GTGACCTCTATGTGATGGAAAGTGTTGAATATACCTCTCTTTATGGAATAAGCCTTCCTTGGGTCATTGA
ACTTTTTATTCCATCTGGGTTCAGAAGAAGCATGGATCAGCTGTTCACACCATCATGGCCAAGAAAGGCC
AAAATAGCCATAGGACTTCTAGAATTTGTGGAAGATGTTTTCCATGGCCCCTACGGAAATTTCCTCATGT
GCGATACTAGTGCCAAAAACCTAGGATATAATGATAAGTATGATTTGAAAATGGTGGATATGAGAAAAAT
TGTGCCAGAGACAAACCTGAAAGAACTTATTAAGGATCGTCACTGTGAGTCTGATTTGGACTGTGTCTAT
GGCACAGATTGTAGAACTAGCTGTGATCAGAGTACAATGAAGTGTACTTCAGAAGTGATACAACCAAACT
TGGCAAAAGCTTGTCAGTTACTCAAAGACTACCTACTGCGTGGTGCTCCAAGTGAAATTCGTGAAGAATT
AGAAAAGCAGCTTTATTCTTGTATTGCTCTCAAAGTCACAGCAAATCAAATGGAAATGGAACATTCTTTG
ATACTAAATAACCTAAAAACATTATTGTGGAAGAAAATTTCCTACACTAATGACTCTTAG

Translation (369 aa):
MARSLCPGAWLRKPYYLQARFSYVRMKYLFFSWLVVFVGSWIIYVQYSTYTELCRGKDCKKIICDKYKTG
VIDGPACNSLCVTETLYFGKCLSTKPNNQAKLGDQGNLSELVNLILTVADGDKDGQVSLGEAKSAWALLQ
LNEFLLMVILQDKEHTPKLMGFCGDLYVMESVEYTSLYGISLPWVIELFIPSGFRRSMDQLFTPSWPRKA
KIAIGLLEFVEDVFHGPYGNFLMCDTSAKNLGYNDKYDLKMVDMRKIVPETNLKELIKDRHCESDLDCVY
GTDCRTSCDQSTMKCTSEVIQPNLAKACQLLKDYLLRGAPSEIREELEKQLYSCIALKVTANQMEMEHSL
ILNNLKTLLWKKISYTNDS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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