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Report for CCDS73289.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
73289.1 Public Homo sapiens 11 OR4A5 24 110 108 CCDS HistoryNCBI Gene:81318Re-query CCDS DB by CCDS ID:73289.1Re-query CCDS DB by GeneID:81318See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 73289.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000319760.8 ENSP00000367664.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000319760.8Link to Ensembl Protein Viewer:ENSP00000367664.2Re-query CCDS DB by Nucleotide ID:ENST00000319760Re-query CCDS DB by Protein ID:ENSP00000367664
Original member Current member NCBI NM_001005272.3 NP_001005272.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001005272.3Link to Protein Sequence:NP_001005272.3Re-query CCDS DB by Nucleotide ID:NM_001005272Re-query CCDS DB by Protein ID:NP_001005272Link to BLAST:NP_001005272.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001005272.3 315 Q8NH83 315 100% 0 0

Chromosomal Locations for CCDS 73289.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 54706885 54707832 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (948 nt):
ATGAGACAGAATAACAATATTACAGAATTTGTCCTCCTGGGCTTTTCTCAGGATCCTGGTGTGCAAAAAG
CATTATTTGTCATGTTTTTACTCACATACTTGGTGACAGTGGTGGGGAACCTGCTCATTGTGGTGGATAT
TATTGCCAGCCCTTCCTTGGGTTCCCCAATGTATTTCTTCCTTGCCTGCCTGTCATTTATAGATGCTGCA
TATTCCACTACCATTTCTCCCAAGTTAATTGTAGGCTTATTCTGTGATAAAAAGACTATTTCCTTCCAAG
GTTGCATGGGCCAGCTATTTATAGACCATTTCTTTGGTGGGGCTGAGGTCTTCCTTCTGGTGGTGATGGC
CTGTGATCGCTATGTGGCCATCTGTAAGCCACTGCACTATTTGACCATCATGAATCGACAGGTTTGCTTC
CTTCTGTTGGTGGTGGCCATGATTGGAGGTTTTGTACATTCTGCGTTTCAAATTGTTGTGTACAGTCTCC
CTTTCTGTGGTCCCAATGTCATTGTTCATTTCAGTTGTGACATGCACCCATTACTGGAACTGGCATGCAC
TGACACCTACTTTATAGGCCTCACTGTTGTTGTCAATAGTGGAGCAATCTGTATGGTCATTTTCAACCTT
CTGTTAATCTCCTATGGAGTCATCCTAAGCTCCCTTAAAACTTACAGTCAGGAAAAGAGGGGTAAAGCCT
TGTCTACCTGCAGCTCCGGCAGTACCGTTGTTGTCCTCTTTTTTGTACCCTGTATTTTCATATATGTTAG
ACCTGTTTCAAACTTTCCTACTGATAAGTTCATGACTGTGTTTTATACCATTATCACACACATGCTGAGT
CCTTTAATATATACGTTGAGAAATTCAGAGATGAGAAATGCTATAGAAAAACTCTTGGGTAAAAAGTTAA
CTATATTTATTATAGGAGGAGTGTCCGTCCTCATGTAG

Translation (315 aa):
MRQNNNITEFVLLGFSQDPGVQKALFVMFLLTYLVTVVGNLLIVVDIIASPSLGSPMYFFLACLSFIDAA
YSTTISPKLIVGLFCDKKTISFQGCMGQLFIDHFFGGAEVFLLVVMACDRYVAICKPLHYLTIMNRQVCF
LLLVVAMIGGFVHSAFQIVVYSLPFCGPNVIVHFSCDMHPLLELACTDTYFIGLTVVVNSGAICMVIFNL
LLISYGVILSSLKTYSQEKRGKALSTCSSGSTVVVLFFVPCIFIYVRPVSNFPTDKFMTVFYTIITHMLS
PLIYTLRNSEMRNAIEKLLGKKLTIFIIGGVSVLM


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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