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Report for CCDS81671.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
81671.1 Public Homo sapiens 12 PLCZ1 24 110 108 CCDS HistoryNCBI Gene:89869Re-query CCDS DB by CCDS ID:81671.1Re-query CCDS DB by GeneID:89869See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 20, NCBI annotation release 108, Ensembl annotation release 85

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 81671.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000539875.5 ENSP00000445026.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000539875.5Link to Ensembl Protein Viewer:ENSP00000445026.1Re-query CCDS DB by Nucleotide ID:ENST00000539875Re-query CCDS DB by Protein ID:ENSP00000445026
Original member Current member NCBI NM_001330769.1 NP_001317698.1 Accepted alive Link to Nucleotide Sequence:NM_001330769.1Link to Protein Sequence:NP_001317698.1Re-query CCDS DB by Nucleotide ID:NM_001330769Re-query CCDS DB by Protein ID:NP_001317698Link to BLAST:NP_001317698.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001317698.1 415 Q86YW0-2 415 100% 0 0

Chromosomal Locations for CCDS 81671.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 18683239 18683324 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 18684130 18684279 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 18688089 18688218 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 18694910 18695079 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 18696150 18696266 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 18699794 18699950 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 18701501 18701568 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 18701692 18701776 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 18705166 18705315 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 18736221 18736344 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 18737361 18737371 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1248 nt):
ATGGAAATGAGATGGTTTTTGTCAAAGATTCAGGATGACTTCAGAGGTGGAAAAATTAACCTAGAAAAAA
CTCAGAGGTTACTTGAAAAATTAGATATTCGGTGCAGTTATATTCATGTGAAACAGATTTTTAAGACATC
TGACTACCCAGTGGTGCTCTCTTTAGAAAATCACTGCTCCACTGCCCAACAAGAAGTAATGGCAGACAAT
TTGCAGGCTACTTTTGGAGAGTCCTTGCTTTCTGATATGCTTGATGATTTTCCTGATACTCTACCATCAC
CAGAGGCACTAAAATTCAAAATATTAGTTAAAAATAAGAAAATAGGAACCTTAAAGGAAACCCATGAAAG
AAAAGGTTCTGATAAGCGTGGAGACAATCAAGACAAGGAAACAGGGGTAAAAAAGTTACCTGGAGTAATG
CTTTTCAAGAAAAAGAAGACCAGGAAGCTAAAAATTGCTCTGGCCTTATCTGATCTTGTCATTTATACGA
AAGCTGAGAAATTCAAAAGCTTTCAACATTCAAGATTATATCAGCAATTTAATGAAAATAATTCTATTGG
GGAGACACAAGCCCGAAAACTTTCAAAATTGCGAGTCCATGAGTTTATTTTTCACACCAGGAAGTTCATT
ACCAGAATATATCCCAAAGCAACAAGAGCAGACTCTTCTAATTTTAATCCCCAAGAATTTTGGAATATAG
GTTGTCAAATGGTGGCTTTAAATTTCCAGACCCCTGGTCTGCCCATGGATCTGCAAAATGGGAAATTTTT
GGATAATGGTGGTTCTGGATATATTTTGAAACCACATTTCTTAAGAGAGAGTAAATCATACTTTAACCCA
AGTAACATAAAAGAGGGTATGCCAATTACACTTACAATAAGGCTCATCAGTGGTATCCAGTTGCCTCTTA
CTCATTCATCATCTAACAAAGGTGATTCATTAGTAATTATAGAAGTTTTTGGTGTTCCAAATGATCAAAT
GAAGCAGCAGACTCGTGTAATTAAAAAAAATGCTTTTAGTCCAAGATGGAATGAAACATTCACATTTATT
ATTCATGTCCCAGAATTGGCATTGATACGTTTTGTTGTTGAAGGTCAAGGTTTAATAGCAGGAAATGAAT
TTCTTGGGCAATATACTTTGCCACTTCTATGCATGAACAAAGGTTATCGTCGTATTCCTCTGTTTTCCAG
AATGGGTGAGAGCCTTGAGCCTGCTTCACTGTTTGTTTATGTTTGGTACGTCAGATAA

Translation (415 aa):
MEMRWFLSKIQDDFRGGKINLEKTQRLLEKLDIRCSYIHVKQIFKTSDYPVVLSLENHCSTAQQEVMADN
LQATFGESLLSDMLDDFPDTLPSPEALKFKILVKNKKIGTLKETHERKGSDKRGDNQDKETGVKKLPGVM
LFKKKKTRKLKIALALSDLVIYTKAEKFKSFQHSRLYQQFNENNSIGETQARKLSKLRVHEFIFHTRKFI
TRIYPKATRADSSNFNPQEFWNIGCQMVALNFQTPGLPMDLQNGKFLDNGGSGYILKPHFLRESKSYFNP
SNIKEGMPITLTIRLISGIQLPLTHSSSNKGDSLVIIEVFGVPNDQMKQQTRVIKKNAFSPRWNETFTFI
IHVPELALIRFVVEGQGLIAGNEFLGQYTLPLLCMNKGYRRIPLFSRMGESLEPASLFVYVWYVR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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