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Report for CCDS82388.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
82388.1 Public Homo sapiens 19 ZNF841 24 110 108 CCDS HistoryNCBI Gene:284371Re-query CCDS DB by CCDS ID:82388.1Re-query CCDS DB by GeneID:284371See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 20, NCBI annotation release 108, Ensembl annotation release 85

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 82388.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000426391.6 ENSP00000415453.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000426391.6Link to Ensembl Protein Viewer:ENSP00000415453.2Re-query CCDS DB by Nucleotide ID:ENST00000426391Re-query CCDS DB by Protein ID:ENSP00000415453
Original member Current member NCBI NM_001321349.2 NP_001308278.1 Accepted alive Link to Nucleotide Sequence:NM_001321349.2Link to Protein Sequence:NP_001308278.1Re-query CCDS DB by Nucleotide ID:NM_001321349Re-query CCDS DB by Protein ID:NP_001308278Link to BLAST:NP_001308278.1
Original member Current member NCBI NM_001369830.1 NP_001356759.1 Accepted alive Link to Nucleotide Sequence:NM_001369830.1Link to Protein Sequence:NP_001356759.1Re-query CCDS DB by Nucleotide ID:NM_001369830Re-query CCDS DB by Protein ID:NP_001356759Link to BLAST:NP_001356759.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001308278.1 808 Q6ZN19-1 808 100% 0 0
NP_001356759.1 808 Q6ZN19-1 808 100% 0 0

Chromosomal Locations for CCDS 82388.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 52065107 52067533 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2427 nt):
ATGTTGGAAGGACATGAAAGCTATGACACTGAAAATTTTTACTTCAGGGAAATCCGGAAAAATCTACAGG
AAGTTGACTTTCAATGGAAAGATGGTGAAATAAATTATAAAGAAGGGCCGATGACCCATAAAAACAATCT
TACTGGTCAAAGAGTTCGACATAGTCAAGGGGACGTAGAAAACAAGCATATGGAAAATCAGCTTATATTA
AGGTTTCAGTCCGGTCTGGGTGAATTGCAGAAATTTCAAACTGCAGAGAAAATTTATGGATGTAATCAAA
TTGAGAGGACAGTTAATAATTGTTTTTTAGCTTCACCACTTCAAAGAATTTTTCCTGGTGTCCAAACCAA
CATTTCTAGGAAATATGGGAATGATTTTTTGCAACTTTCGTTACCTACACAAGACGAGAAAACACATATT
AGGGAAAAACCTTACATAGGTAATGAGTGTGGCAAAGCCTTCAGAGTGTCTTCAAGTCTTATTAATCATC
AGATGATACATACTACAGAGAAACCTTACAGATGCAATGAGTCTGGTAAAGCCTTTCATCGGGGCTCACT
ACTAACAGTACATCAGATAGTCCATACAAGAGGGAAACCATACCAATGTGATGTATGTGGCAGGATCTTC
AGACAAAATTCAGATCTTGTAAATCACCGGAGAAGTCACACTGGAGACAAACCCTACATATGTAATGAAT
GTGGCAAGTCCTTTAGTAAAAGTTCCCACCTTGCAGTTCATCAGAGAATTCATACTGGAGAGAAACCTTA
CAAATGTAATCGATGTGGGAAGTGCTTTAGTCAAAGTTCCTCTCTTGCAACTCATCAGACAGTTCATACT
GGAGACAAACCCTACAAATGTAATGAATGTGGCAAAACCTTTAAACGGAACTCAAGCCTCACTGCACATC
ATATAATCCATGCAGGAAAGAAACCATATACATGTGATGTATGTGGCAAGGTCTTTTATCAGAATTCACA
ACTTGTAAGGCACCAGATAATTCATACTGGAGAGACACCTTACAAATGTAATGAATGTGGCAAGGTCTTC
TTTCAACGTTCACGTCTTGCAGGGCACCGGAGAATTCATACTGGAGAGAAACCCTACAAATGTAATGAAT
GTGGCAAGGTCTTCAGTCAACATTCACATCTTGCAGTGCATCAGAGAGTTCATACTGGAGAGAAACCTTA
CAAATGTAATGAATGTGGCAAAGCCTTTAATTGGGGCTCATTACTAACTGTACATCAGAGAATTCATACC
GGAGAGAAACCTTACAAATGTAATGTGTGTGGCAAGGTCTTTAATTACGGTGGATACCTTTCGGTTCATA
TGAGATGTCATACTGGAGAGAAACCTCTCCATTGTAATAAATGTGGCATGGTCTTCACTTACTATTCATG
CCTAGCACGTCATCAAAGAATGCATACCGGAGAGAAACCTTACAAATGTAATGTGTGTGGCAAGGTCTTC
ATTGACAGTGGAAACCTTTCAATTCATAGGCGAAGTCATACCGGAGAGAAACCTTTCCAGTGTAACGAAT
GCGGCAAGGTCTTCAGTTACTACTCATGCCTAGCACGTCATCGGAAAATTCATACCGGAGAGAAACCTTA
TAAATGTAATGATTGTGGCAAAGCCTATACTCAGCGTTCAAGCCTCACTAAACATCTGGTAATTCATACT
GGAGAGAACCCTTACCACTGTAATGAATTTGGTGAGGCTTTTATCCAAAGTTCAAAACTTGCAAGATATC
ACAGAAATCCTACTGGGGAGAAACCACACAAATGTAGTGAATGTGGTAGAACTTTTAGTCATAAAACAAG
TCTGGTGTACCATCAGAGAAGACATACTGGAGAGATGCCATACAAATGTATTGAATGTGGGAAAGTCTTT
AACTCCACTACAACCCTGGCAAGGCATCGGAGAATTCATACTGGAGAGAAACCTTACAAATGTAATGAAT
GTGGCAAGGTCTTCCGTTATCGCTCAGGCCTCGCACGTCATTGGAGTATTCATACTGGAGAGAAACCTTA
CAAATGTAATGAGTGTGGCAAAGCCTTTAGAGTACGTTCAATTCTGCTTAATCATCAGATGATGCATACT
GGAGAGAAACCTTATAAATGTAATGAATGTGGTAAAGCTTTTATCGAAAGGTCAAACTTGGTTTACCATC
AGAGAAACCATACTGGAGAGAAGCCATACAAATGTATGGAATGTGGCAAGGCGTTTGGGCGGCGGTCTTG
CCTCACTAAACACCAACGAATTCATTCTAGTGAAAAACCTTATAAATGTAATGAGTGTGGCAAATCTTAC
ATTAGTCGCTCAGGCCTCACTAAACATCAGATAAAACATGCTGGAGAGAACCTTACAACTAAACTCAATG
TGGAAAGGCCGTTAGATGTTGTCCTAACCTCTGGGATCCCCAAATAA

Translation (808 aa):
MLEGHESYDTENFYFREIRKNLQEVDFQWKDGEINYKEGPMTHKNNLTGQRVRHSQGDVENKHMENQLIL
RFQSGLGELQKFQTAEKIYGCNQIERTVNNCFLASPLQRIFPGVQTNISRKYGNDFLQLSLPTQDEKTHI
REKPYIGNECGKAFRVSSSLINHQMIHTTEKPYRCNESGKAFHRGSLLTVHQIVHTRGKPYQCDVCGRIF
RQNSDLVNHRRSHTGDKPYICNECGKSFSKSSHLAVHQRIHTGEKPYKCNRCGKCFSQSSSLATHQTVHT
GDKPYKCNECGKTFKRNSSLTAHHIIHAGKKPYTCDVCGKVFYQNSQLVRHQIIHTGETPYKCNECGKVF
FQRSRLAGHRRIHTGEKPYKCNECGKVFSQHSHLAVHQRVHTGEKPYKCNECGKAFNWGSLLTVHQRIHT
GEKPYKCNVCGKVFNYGGYLSVHMRCHTGEKPLHCNKCGMVFTYYSCLARHQRMHTGEKPYKCNVCGKVF
IDSGNLSIHRRSHTGEKPFQCNECGKVFSYYSCLARHRKIHTGEKPYKCNDCGKAYTQRSSLTKHLVIHT
GENPYHCNEFGEAFIQSSKLARYHRNPTGEKPHKCSECGRTFSHKTSLVYHQRRHTGEMPYKCIECGKVF
NSTTTLARHRRIHTGEKPYKCNECGKVFRYRSGLARHWSIHTGEKPYKCNECGKAFRVRSILLNHQMMHT
GEKPYKCNECGKAFIERSNLVYHQRNHTGEKPYKCMECGKAFGRRSCLTKHQRIHSSEKPYKCNECGKSY
ISRSGLTKHQIKHAGENLTTKLNVERPLDVVLTSGIPK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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