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Report for CCDS93996.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
93996.1 Public Homo sapiens 6 TBC1D32 24 110 108 CCDS HistoryNCBI Gene:221322Re-query CCDS DB by CCDS ID:93996.1Re-query CCDS DB by GeneID:221322See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 93996.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000275159.10 ENSP00000275159.6 Accepted alive Link to Ensembl Transcript Viewer:ENST00000275159.10Link to Ensembl Protein Viewer:ENSP00000275159.6Re-query CCDS DB by Nucleotide ID:ENST00000275159Re-query CCDS DB by Protein ID:ENSP00000275159
Original member Current member NCBI NM_001367759.1 NP_001354688.1 Accepted alive Link to Nucleotide Sequence:NM_001367759.1Link to Protein Sequence:NP_001354688.1Re-query CCDS DB by Nucleotide ID:NM_001367759Re-query CCDS DB by Protein ID:NP_001354688Link to BLAST:NP_001354688.1
Original member Current member NCBI NM_001367760.1 NP_001354689.1 Accepted alive Link to Nucleotide Sequence:NM_001367760.1Link to Protein Sequence:NP_001354689.1Re-query CCDS DB by Nucleotide ID:NM_001367760Re-query CCDS DB by Protein ID:NP_001354689Link to BLAST:NP_001354689.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001354688.1 1298 Q96NH3-4 1298 100% 0 0
NP_001354689.1 1298 Q96NH3-4 1298 100% 0 0

Chromosomal Locations for CCDS 93996.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 6 (NC_000006.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 121080771 121080890 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 121090853 121091041 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 121106023 121106163 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 121112505 121112659 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 121113062 121113177 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 121115172 121115241 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 121126378 121126461 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 121131627 121131752 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 121160010 121160103 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 121160948 121161056 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 121170405 121170527 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 121205075 121205163 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 121223236 121223352 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 121239070 121239188 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 121241465 121241552 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 121242201 121242339 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 121255328 121255410 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 121256084 121256285 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 121279121 121279245 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 121281544 121281686 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 121283818 121283910 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 121292053 121292193 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 121294570 121294660 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 121299446 121299505 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 121303617 121303761 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 121304365 121304426 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 121304522 121304625 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 121304755 121304833 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 121307976 121308101 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 121310779 121310847 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 121317495 121317672 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 121321633 121321794 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 121334276 121334430 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3897 nt):
ATGGCCCATTTCTCCAGCGAGGACCAGGCGATGCTGCAGGCGATGCTGAGGCGGTTGTTCCAGAGCGTGA
AGGAGAAAATCACGGGTGCCCCTTCCCTGGAGTGTGCCGAAGAGATTCTTTTACATCTGGAGGAAACTGA
TGAAAATTTTCACAACTATGAATTTGTGAAATACCTCAGGCAGCATATAGGCAACACTTTGGGTTCTATG
ATTGAAGAAGAAATGGAAAAATGCACATCTGATCGGAATCAGGGTGAAGAATGCGGCTATGATACAGTTG
TACAGCAGGTCACTAAAAGAACTCAAGAATCTAAAGAGTACAAAGAAATGATGCATTACCTGAAGAACAT
TATGATAGCTGTGGTCGAGTCTATGATTAACAAGTTTGAAGAAGATGAGACACGAAATCAAGAAAGGCAG
AAAAAAATCCAAAAGGAGAAAAGCCATAGTTACCGCACAGACAATTGCTCTGATAGTGATTCATCATTGA
ATCAGAGTTACAAATTTTGTCAAGGAAAATTACAATTGATTTTAGACCAGTTGGATCCTGGGCAACCTAA
AGAGGTGAGATATGAAGCCTTGCAAACATTATGTTCAGCTCCTCCATCTGATGTCCTCAACTGTGAAAAT
TGGACTACTCTCTGCGAAAAACTGACCGTGTCTCTTTCAGATCCTGATCCTGTGTTTAGTGACCGGATTT
TAAAATTCTGTGCACAGACATTTTTGCTTTCTCCATTACATATGACCAAGGAAATTTATACAAGCTTAGC
TAAGTATTTGGAGTCATACTTTCTTTCTAGGGAAAATCATATTCCTACTCTTTCAGCTGGTGTAGATATA
ACTAATCCTAATATGACTCGCTTACTTAAAAAGGTTCGTCTTCTAAATGAATATCAGAAAGAAGCTCCAT
CTTTCTGGATTCGTCATCCAGAGAAGTATATGGAAGAAATTGTGGAGAGTACTTTGTCCTTGTTAACAGT
TAAACATAATCAAAGCCATGTTGTCTCACAAAAGATTTTGGATCCGATCTACTTTTTTGCATTAGTTGAT
ACCAAGGCTGTGTGGTTCAAAAAGTGGATGCATGCACATTATAGCAGAACTACAGTATTAAGACTTCTTG
AAACGAAATATAAGTCTCTGGTAACTACAGCCATTCAACAGTGTGTTCAGTACTTTGAAATGTGTAAGAC
TAGGAAAGCTGATGAAACTTTGGGACATTCAAAGCATTGCAGAAACAAGCAGAAAACTTTCTACTACTTA
GGACAAGAATTACAATATATTTATTTCATTCACTCACTGTGCCTTTTAGGAAGATTATTGATCTATAAAC
AAGGCAGAAAACTATTTCCTATTAAGCTGAAGAATAAAAAAGGTTTGGTATCCCTCATAGATCTGCTTGT
TCTTTTTACCCAACTTATCTATTACTCACCAAGTTGTCCAAAGATGACATCAGCTGCCCATTCAGAGAAT
TACTCTCCTGCAAGTATGGTGACTGAAGTTCTGTGGATACTCAGTGATCAAAAAGAATGTGCAGTGGAAT
GCTTATATAACAACATTGTAATAGAGACACTTCTTCAGCCTATTCACAATTTAATGAAAGGAAATGAGGC
ATCTCCAAATTGCTCTGAGACAGCTTTAATTCATATAGCTGGTATTTTGGCAAGAATTGCATCTGTAGAA
GAAGGGCTTATTTTACTCCTTTATGGAGCAAATATGAACTCTTCTGAAGAAAGTCCTACAGGTGCTCATA
TAATTGCCCAGTTTTCGAAAAAACTTCTCGATGAAGATATTTCTATATTTTCTGGATCAGAAATGTTGCC
TGTGGTTAAAGGAGCTTTTATTTCTGTGTGTCGTCACATATATAGTACATGTGAAGGTTTGCAGGTGTTA
ATCACTTATAATTTGCATGAATCTATAGCAAAGGCATGGAAAAAGACAAGTTTGCTATCAGAAAGAATTC
CTACTCCAGTAGAGGGTTCTGATTCTGTTTCTTCAGTAAGCCAGGAATCCCAAAACATTATGGCTTGGGA
AGATAATTTGTTAGATGATTTACTACATTTTGCTGCCACCCCCAAAGGATTACTACTTCTTCAAAGAACA
GGTGCTATCAATGAATGTGTGACATTTATATTCAATCGATATGCAAAAAAATTACAGGTCAGCAGGCATA
AAAAATTTGGCTATGGAGTTTTGGTTACACGAGTGGCATCAACAGCAGCAGGTGGCATTGCACTAAAAAA
GTCAGGGTTTATTAATGAACTTATAACTGAATTATGGTCCAATCTGGAATATGGAAGAGATGATGTTAGG
GTAACCCATCCCAGAACTACTCCAGTGGATCCTATTGACCGAAGCTGTCAAAAGTCTTTTTTAGCACTGG
TGAACTTGTTATCCTATCCTGCTATTTATGAGCTTGTAAGGAATCAAGATCTTCCTAATAAAACAGAATA
TTCTCTTCGTGAAGTCCCAACATGTGTTATTGATATTATTGATAGACTTATAATTTTGAATTCTGAAGCT
AAGATTCGTTCTTTATTCAACTATGAACAATCACATATCTTTGGTCTAAGGTTATTAAGTGTGATATGCT
GTGATCTGGACACTCTTCTCCTGTTAGAGGCTCAGTATCAGGTATCTGAAATGTTACTAAATGCTCAAGA
AGAAAATATCTTGGAGATTTCTGAGAGCCACAGGGACTTTATAATTGATGGCTTATCAGTGGAGAGAAAT
CATGTTCTTGTTAGAATAAATCTTGTTGGTGGGCCATTGGAACGGATTTTGCCTCCGAGGTTACTCGAAA
AGAGTGATAATCCATATCCTTGGCCAATGTTTTCATCATATCCATTGCCAAACTGCTATCTGTCAGACAT
TACAAGAAATGCTGGTATAAAACAAGACAATGATCTTGACAAGCTTTTATTATGCCTCAAAATATCTGAT
AAACAAACTGAATGGATAGAAAACTGCCAAAGACAATTTTGCAAAATGATGAAAGCCAAACCTGATATAA
TCAGTGGAGAGGCCTTAATAGAATTACTTGAAAAATTTGTGCTTCATCTCACTGAAAGCCCATCTGAATG
CTACTTCCCTTCAGTGGAGTATACAGCTACTGATGCAAATGTGAAGAATGAAAGTCTTTCATCTGTGCAG
CAGCTTGGCATTAAAATGACTGTCAGGTATGGCAAATTCCTCAGTCTCTTAAAAGATGGTGCAGAAAATG
ATCTTACCTGGGTTTTAAAGCATTGTGAGAGATTCCTGAAACAGCAGCAAACTTCCATAAAATCTTCTCT
TCTCTGCCTGCAAGGGAATTATGCTGGCCATGACTGGTTTGTATCTTCTCTGTTCATGATAATGTTGGGA
GACAAAGAAAAAACATTCCAATTTCTTCATCAATTCTCCAGGCTTCTGACTTCTGCTTTTCTTTGGTTGC
CAAGGCTACATATTTCTAGTTACCTTCCTAATGACACTGTAGAATCTGGCATCCATCCAGTATATTTTTG
CAGCACCCATTATATTGAAATGCTACTGAAGGCTGAGTTGCCTCTTGTGTTTTCAGCTTTTCACATGTCT
GGTTTTGCACCATCACAGATTTGCCTGCAATGGATAACCCAGTGTTTTTGGAATTACTTAGATTGGATAG
AAATCTGCCATTATATTGCTACTTGTGTTTTCCTTGGTCCTGATTATCAAGTGTATATCTGTATAGCTGT
ATTCAAACATTTACAGCAAGACATTCTACAGCACACTCAGACTCAAGATCTGCAAGTTTTCCTAAAAGAA
GAAGCACTGCATGGGTTTCGAGTGAGTGATTATTTTGAATACATGGAAATTTTGGAACAAAACTACCGAA
CAGTGCTGCTGAGAGACATGCGGAACATTAGACTGCAGAGCACATAG

Translation (1298 aa):
MAHFSSEDQAMLQAMLRRLFQSVKEKITGAPSLECAEEILLHLEETDENFHNYEFVKYLRQHIGNTLGSM
IEEEMEKCTSDRNQGEECGYDTVVQQVTKRTQESKEYKEMMHYLKNIMIAVVESMINKFEEDETRNQERQ
KKIQKEKSHSYRTDNCSDSDSSLNQSYKFCQGKLQLILDQLDPGQPKEVRYEALQTLCSAPPSDVLNCEN
WTTLCEKLTVSLSDPDPVFSDRILKFCAQTFLLSPLHMTKEIYTSLAKYLESYFLSRENHIPTLSAGVDI
TNPNMTRLLKKVRLLNEYQKEAPSFWIRHPEKYMEEIVESTLSLLTVKHNQSHVVSQKILDPIYFFALVD
TKAVWFKKWMHAHYSRTTVLRLLETKYKSLVTTAIQQCVQYFEMCKTRKADETLGHSKHCRNKQKTFYYL
GQELQYIYFIHSLCLLGRLLIYKQGRKLFPIKLKNKKGLVSLIDLLVLFTQLIYYSPSCPKMTSAAHSEN
YSPASMVTEVLWILSDQKECAVECLYNNIVIETLLQPIHNLMKGNEASPNCSETALIHIAGILARIASVE
EGLILLLYGANMNSSEESPTGAHIIAQFSKKLLDEDISIFSGSEMLPVVKGAFISVCRHIYSTCEGLQVL
ITYNLHESIAKAWKKTSLLSERIPTPVEGSDSVSSVSQESQNIMAWEDNLLDDLLHFAATPKGLLLLQRT
GAINECVTFIFNRYAKKLQVSRHKKFGYGVLVTRVASTAAGGIALKKSGFINELITELWSNLEYGRDDVR
VTHPRTTPVDPIDRSCQKSFLALVNLLSYPAIYELVRNQDLPNKTEYSLREVPTCVIDIIDRLIILNSEA
KIRSLFNYEQSHIFGLRLLSVICCDLDTLLLLEAQYQVSEMLLNAQEENILEISESHRDFIIDGLSVERN
HVLVRINLVGGPLERILPPRLLEKSDNPYPWPMFSSYPLPNCYLSDITRNAGIKQDNDLDKLLLCLKISD
KQTEWIENCQRQFCKMMKAKPDIISGEALIELLEKFVLHLTESPSECYFPSVEYTATDANVKNESLSSVQ
QLGIKMTVRYGKFLSLLKDGAENDLTWVLKHCERFLKQQQTSIKSSLLCLQGNYAGHDWFVSSLFMIMLG
DKEKTFQFLHQFSRLLTSAFLWLPRLHISSYLPNDTVESGIHPVYFCSTHYIEMLLKAELPLVFSAFHMS
GFAPSQICLQWITQCFWNYLDWIEICHYIATCVFLGPDYQVYICIAVFKHLQQDILQHTQTQDLQVFLKE
EALHGFRVSDYFEYMEILEQNYRTVLLRDMRNIRLQST


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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