|
Name |
Accession |
Description |
Interval |
E-value |
| ND4 |
MTH00124 |
NADH dehydrogenase subunit 4; Provisional |
1-457 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214427 [Multi-domain] Cd Length: 457 Bit Score: 711.20 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 1 MLKILLPTAMLLPTALLSHQKLLWTNTTAHSLLIATISLHWLLPTYYPHKNLTQWMSTDQISSPLLVLSCWLLPLMLLAS 80
Cdd:MTH00124 1 MLKIILPTIMLIPTTLLSKPKFLWTNTTTYSLLIALLSLQWLKPPYYPTKNLTQWLGIDQISAPLLVLSCWLLPLMILAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 81 QNHLQHEPPIRKRIFITTLITVQPLLLLAFSATELMLFYITFEATLIPTLILITRWGSQPERLSAGIYLLFYTLISSLPL 160
Cdd:MTH00124 81 QNHLQHEPLQRKRTFLTTLILLQTFLILAFSATELTLFYIMFEATLIPTLILITRWGNQPERLSAGTYFLFYTLISSLPL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 161 LVTILYLHTHIGTLHLTMLKLSHPTLTNSWTDLLLSLALLMAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGG 240
Cdd:MTH00124 161 LIAILYLHNQTGTLSLPMLQLTHPTLTNSWTNLLLWLACLMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 241 YGIMRLTLLIGPLPPHLHYPFLTLALWGALMTSSICLRQTDLKSLIAYSSVSHMGLVIAASILQTHWSFSGAMILMISHG 320
Cdd:MTH00124 241 YGIIRITLLLPPLSNTLHYPFLTLALWGALMTSLICLRQTDLKSLIAYSSVSHMGLVIAATMIQTPWSLSGAMILMIAHG 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 321 LTSSMLFCLANTTYERTHSRILLLTRGLQPLLPLMATWWLLANLTNMALPPTTNLMAELTIMIALFNWSVLTIFLTGTAT 400
Cdd:MTH00124 321 LTSSMLFCLANTNYERTHSRTLLLTRGLQLLLPLMTTWWLLANLTNMALPPTINLMGELTIMTSLFNWSPTTIILTGLAT 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*..
gi 2772189694 401 LLTASYTLFMLLTTQRGTSPTHITSLQNSSTREHLLMTLHITPLLLLISKPEMISGM 457
Cdd:MTH00124 401 LITASYTLYMFLSTQRGTLPTHITTIQPTHTREHLLMTLHIIPLLLLILKPELISGT 457
|
|
| ND4 |
MTH00068 |
NADH dehydrogenase subunit 4; Provisional |
1-457 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214417 [Multi-domain] Cd Length: 458 Bit Score: 584.19 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 1 MLKILLPTAMLLPTALLSHQKLLWTNTTAHSLLIATISLHWLLPTYYPHKNLTQWMSTDQISSPLLVLSCWLLPLMLLAS 80
Cdd:MTH00068 1 MLKIIIPTLMLLPTTWLSPKKWLWTLTTTNSLIIAFLSLMWFNLPSETMNFTNKYFGIDQISSPLLILTCWLLPLMILAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 81 QNHLQHEPPIRKRIFITTLITVQPLLLLAFSATELMLFYITFEATLIPTLILITRWGSQPERLSAGIYLLFYTLISSLPL 160
Cdd:MTH00068 81 QNHLKNEPINRQRTYISMLIILQLTLILAFSATELILFYIFFEATLIPTLIIITRWGNQEERLNAGTYFLFYTLAGSLPL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 161 LVTILYLHTHIGTLHLTMLKLSHPTLTNSWTDLLLSLALLMAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGG 240
Cdd:MTH00068 161 LIALLILQNSLGSLSLILLELMSPMQLMTYTNKIWWLACLLAFMVKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLGG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 241 YGIMRLTLLIGPLPPHLHYPFLTLALWGALMTSSICLRQTDLKSLIAYSSVSHMGLVIAASILQTHWSFSGAMILMISHG 320
Cdd:MTH00068 241 YGILRISILLTPLSKELSYPFIILALWGVLMTSLICLRQTDLKSLIAYSSVSHMGLVIAAALIQTPWSFSGAIILMISHG 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 321 LTSSMLFCLANTTYERTHSRILLLTRGLQPLLPLMATWWLLANLTNMALPPTTNLMAELTIMIALFNWSVLTIFLTGTAT 400
Cdd:MTH00068 321 LTSSALFCLANTNYERTHSRTLLLLRGAQTILPLMATWWLLSNLSNMALPPSPNLWGELTIMVSLFNWSNWTILITGLGT 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*..
gi 2772189694 401 LLTASYTLFMLLTTQRGTSPTHITSLQNSSTREHLLMTLHITPLLLLISKPEMISGM 457
Cdd:MTH00068 401 LITAAYTLYMFLMTQRGPLPNHLKTLFPTYTREHLLLALHILPMLLLILKPELISGM 457
|
|
| ND4 |
MTH00110 |
NADH dehydrogenase subunit 4; Provisional |
1-456 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177172 [Multi-domain] Cd Length: 459 Bit Score: 579.93 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 1 MLKILLPTAMLLPTALLSHQKLLWTNTTAHSLLIATISLHWLLPTYYPHKNLTQWMSTDQISSPLLVLSCWLLPLMLLAS 80
Cdd:MTH00110 1 MLKIIIPTIMLIPLTWLSKNNMIWINTTTYSLLISLISLLLLNQPNDNSLNFSLLFFSDSLSTPLLILTTWLLPLMLMAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 81 QNHLQHEPPIRKRIFITTLITVQPLLLLAFSATELMLFYITFEATLIPTLILITRWGSQPERLSAGIYLLFYTLISSLPL 160
Cdd:MTH00110 81 QHHLSKEPLTRKKLYITMLILLQLFLIMTFTATELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 161 LVTILYLHTHIGTLHLTMLKLSHPTLTNSWTDLLLSLALLMAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGG 240
Cdd:MTH00110 161 LVALLYIQNNLGSLNFLLLQLWAQPLPNSWSNNLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 241 YGIMRLTLLIGPLPPHLHYPFLTLALWGALMTSSICLRQTDLKSLIAYSSVSHMGLVIAASILQTHWSFSGAMILMISHG 320
Cdd:MTH00110 241 YGMMRITIILNPLTEFMAYPFLMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHG 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 321 LTSSMLFCLANTTYERTHSRILLLTRGLQPLLPLMATWWLLANLTNMALPPTTNLMAELTIMIALFNWSVLTIFLTGTAT 400
Cdd:MTH00110 321 LTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVIMSSFSWSNITIILMGLNM 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*.
gi 2772189694 401 LLTASYTLFMLLTTQRGTSPTHITSLQNSSTREHLLMTLHITPLLLLISKPEMISG 456
Cdd:MTH00110 401 LITALYSLYMLITTQRGKLTHHINNIKPSFTRENTLMALHLLPLLLLSLNPKIILG 456
|
|
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
1-456 |
1.08e-167 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 479.84 E-value: 1.08e-167
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 1 MLKILLPTAMLLPTALLSHQKLLWTNTTAHSLLIATISLHWL-LPTYYPHKNLTQWMSTDQISSPLLVLSCWLLPLMLLA 79
Cdd:MTH00127 1 MLKILIPTLMLIPTTWLTPAKWLWTTTLAHSLLIALASLTWLkNLSETGWSSLNLYMATDPLSTPLLVLTCWLLPLMILA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 80 SQNHLQHEPPIRKRIFITTLITVQPLLLLAFSATELMLFYITFEATLIPTLILITRWGSQPERLSAGIYLLFYTLISSLP 159
Cdd:MTH00127 81 SQNHTAPEPINRQRMYITLLTSLQIFLILAFGATEIIMFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLP 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 160 LLVTILYLHTHIGTLHLTMLKLSHPTLTNSWTDLLLSLALLMAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLG 239
Cdd:MTH00127 161 LLVALLLLQNSTGTLSMLTLQYSQPLQLSSWADKLWWAGCLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 240 GYGIMRLTLLIGPLPPHLHYPFLTLALWGALMTSSICLRQTDLKSLIAYSSVSHMGLVIAASILQTHWSFSGAMILMISH 319
Cdd:MTH00127 241 GYGMMRMMVMLDPLTKELSYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAH 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 320 GLTSSMLFCLANTTYERTHSRILLLTRGLQPLLPLMATWWLLANLTNMALPPTTNLMAELTIMIALFNWSVLTIFLTGTA 399
Cdd:MTH00127 321 GLTSSALFCLANTNYERTHSRTMLLARGLQMILPLMATWWFIASLANLALPPLPNLMGELMIITSLFNWSPWTLALTGLG 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*..
gi 2772189694 400 TLLTASYTLFMLLTTQRGTSPTHITSLQNSSTREHLLMTLHITPLLLLISKPEMISG 456
Cdd:MTH00127 401 TLITAGYSLYMFLMTQRGPLPDHIIALNPSHTREHLLMALHLLPLLLLILKPELIWG 457
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
3-454 |
2.84e-160 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 460.56 E-value: 2.84e-160
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 3 KILLPTAMLLPTALLSHQKLLWTNTTAHSLLIATISLHWLL-PTYYPHKNLTQWMSTDQISSPLLVLSCWLLPLMLLASQ 81
Cdd:MTH00206 1 KILIPLIMLLLMTILSKKKWLWRSTTFFSFLIALLFLLWFKwSSEVGWSFSNLYLSYDPLSSPLVILSCWLLPLMFLASQ 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 82 NHLQHEPPIRKRIFITTLITVQPLLLLAFSATELMLFYITFEATLIPTLILITRWGSQPERLSAGIYLLFYTLISSLPLL 161
Cdd:MTH00206 81 NHMKNEPINRQRIYITLLIVLQLFLILFFSSSNLLLFYILFEASLIPTLLLITRWGNQKERLNAGYYFLFYTLIGSLPLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 162 VTILYLHTHIGTLHLTMLKLSHPTltnSWTDLLLSLALLMAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGY 241
Cdd:MTH00206 161 IALLFLQNSLGSLSLYILYFSKLT---TWNNNLWWLACILAFLVKLPLYGVHLWLPKAHVEAPVAGSMVLAGVLLKLGGY 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 242 GIMRLTLLIGPLPPHLHYPFLTLALWGALMTSSICLRQTDLKSLIAYSSVSHMGLVIAASILQTHWSFSGAMILMISHGL 321
Cdd:MTH00206 238 GMMRIILILGPSTKLSSYFFIILGLWGSIMTSSICLRQTDLKSLIAYSSVSHMSLVTAGILSGSPWGFKGALLLMIAHGL 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 322 TSSMLFCLANTTYERTHSRILLLTRGLQPLLPLMATWWLLANLTNMALPPTTNLMAELTIMIALFNWSVLTIFLTGTATL 401
Cdd:MTH00206 318 VSSALFCLANLLYERSHTRTILGNRGLQMILPLLSFWWLLFFLANLGLPPFPNLFGELLIITSLFSWSNFTLPLLGLGFL 397
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|...
gi 2772189694 402 LTASYTLFMLLTTQRGTSPTHITSLQNSSTREHLLMTLHITPLLLLISKPEMI 454
Cdd:MTH00206 398 FTAIYSLYMFVMTQHGKTPNHLLSLSPSSTREHLLLFLHLFPVILLILNPNLI 450
|
|
| ND4 |
MTH00044 |
NADH dehydrogenase subunit 4; Validated |
1-455 |
2.31e-142 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214411 [Multi-domain] Cd Length: 458 Bit Score: 415.14 E-value: 2.31e-142
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 1 MLKILLPTAMLLPTALLSHQKLLWTNTTAHSLLIATISLHWLLPTYY-PHKNLTQWMSTDQISSPLLVLSCWLLPLMLLA 79
Cdd:MTH00044 1 MITLILLSLGIAITSWIVPKNKLWPISISQSSLISLLSLFLLNNHWSsSWHNLSLSLATDSLSSPLIILSCWLAPLSLLA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 80 SQNHLQHEPPIRKRIFITTLITVQPLLLLAFSATELMLFYITFEATLIPTLILITRWGSQPERLSAGIYLLFYTLISSLP 159
Cdd:MTH00044 81 SINHLSNNSPNNQRTFISLIIIILTALIITFSSLELILFYIAFETTLIPTLILITRWGAQKERIQAGLYFLFYTLFGSLP 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 160 LLVTILYLHTHIGTLHLTMLKLSHPTLTNSWTDLLLSLALLMAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLG 239
Cdd:MTH00044 161 LLISLIAIYSSSSSLSIPLSELNWLTSLSSNSSSIWWIFCILAFLVKMPIYGFHLWLPKAHVEAPVAGSMILAAILLKLG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 240 GYGIMRLTLLIG-PLPPHLHYPFLTLALWGALMTSSICLRQTDLKSLIAYSSVSHMGLVIAASILQTHWSFSGAMILMIS 318
Cdd:MTH00044 241 GYGLIRLINLFSlPSANNISFILIVFCCWGALITSIICLRQTDLKALIAYSSVGHMSLVAAGIFSGTNWGINGALILMIA 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 319 HGLTSSMLFCLANTTYERTHSRILLLTRGLQPLLPLMATWWLLANLTNMALPPTTNLMAELTIMIALFNWSVLTIFLTGT 398
Cdd:MTH00044 321 HGLVSSALFCLANILYERSGTRTLSITRGFKLITPLLPLWWLIFCAANLGLPPLPNLIGELLIISSIISWSILSFPIIGL 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*..
gi 2772189694 399 ATLLTASYTLFMLLTTQRGTSPTHITSLQNSSTREHLLMTLHITPLLLLISKPEMIS 455
Cdd:MTH00044 401 ATVFGAIYSLLIYQLTNSGSFPSWISNVSPISSREHLLIFLHLLPLILIIINPNIIL 457
|
|
| ND4 |
MTH00163 |
NADH dehydrogenase subunit 4; Provisional |
1-454 |
5.82e-116 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214443 [Multi-domain] Cd Length: 445 Bit Score: 347.53 E-value: 5.82e-116
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 1 MLKILLPTAMLLPtalLSHQKLLWtNTTAHSLLIATISLHWLLPTYYPHKNLTQWMSTDQISSPLLVLSCWLLPLMLLAS 80
Cdd:MTH00163 1 MLKFLFMLLFLIP---LCFLKNSW-WLVQSLLFLLSFLFMLLFSLSFYFSNISYFFGLDLLSFGLILLSFWICMLMILSS 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 81 QNHLQHEPPIRKRIFITTLITVqpLLLLAFSATELMLFYITFEATLIPTLILITRWGSQPERLSAGIYLLFYTLISSLPL 160
Cdd:MTH00163 77 ESVYKKNNYSNLFLFLILFLLI--FLLLTFSSMNLLLFYIFFESSLIPTLFLILGWGYQPERLQAGIYLLFYTLFASLPL 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 161 LVTILYLHTHIGTLHLTMLKLShptltnSWTDLLLSLALLMAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGG 240
Cdd:MTH00163 155 LVGIFYLYNNSGSLSFFLLNFF------GSLNFLWYLSMILAFLVKMPMFFVHLWLPKAHVEAPVSGSMILAGVLLKLGG 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 241 YGIMRLTLLIGPLPPHLHYPFLTLALWGALMTSSICLRQTDLKSLIAYSSVSHMGLVIAASILQTHWSFSGAMILMISHG 320
Cdd:MTH00163 229 YGLLRVMSFFSKLGLKFNYIWISISLVGGVIVSLICLRQVDLKSLIAYSSVAHMGLVLGGLMTFSYWGLMGSLLMMIGHG 308
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 321 LTSSMLFCLANTTYERTHSRILLLTRGLQPLLPLMATWWLLANLTNMALPPTTNLMAELTIMIALFNWSVLTIFLTGTAT 400
Cdd:MTH00163 309 LCSSGLFCLANIIYERLGSRSLLINKGLLNFMPSMSLWWFLLSSSNMAAPPSLNLLGEISLINSLISWSKLSMIFLMLLS 388
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....
gi 2772189694 401 LLTASYTLFMLLTTQRGTSPTHITSLQNSSTREHLLMTLHITPLLLLISKPEMI 454
Cdd:MTH00163 389 FFSAAYSLYLYSYSQHGKYYSGLYSCSSGKVREYLLLFLHWLPLNLLILKSDLF 442
|
|
| ND4 |
MTH00150 |
NADH dehydrogenase subunit 4; Provisional |
52-457 |
5.55e-111 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214435 [Multi-domain] Cd Length: 417 Bit Score: 333.73 E-value: 5.55e-111
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 52 LTQWMSTDQISSPLLVLSCWLLPLMLLASQNHLQHEPPIRKRIFITTLITVqpLLLLAFSATELMLFYITFEATLIPTLI 131
Cdd:MTH00150 16 LSELFSVDSMSSLLISLSLWISGLMMLASQKSVKLRNKSSSFSLLVLLLCL--ILVLAFSVSSLLMFYFFFEASLIPTLL 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 132 LITRWGSQPERLSAGIYLLFYTLISSLPLLVTILYLHTHIGTLHLTMLKLSHPTLTNSWtdlLLSLALLMAFMVKAPLYG 211
Cdd:MTH00150 94 LILGWGYQPERLQAGMYMMLYTVGASLPLLLVILWMSSSYGSSFMLLISSLRKLLSSMG---LWGLLVFLAFLVKLPMYP 170
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 212 LHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRLTLLIGPLPPHLHYPFLTLALWGALMTSSICLRQTDLKSLIAYSSV 291
Cdd:MTH00150 171 FHLWLPKAHVEAPVAGSMILAGILLKLGGYGILRMMMVFSLSSSSFSIFLISLSLWGGVLTSLICLRQSDVKSLIAYSSV 250
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 292 SHMGLVIAASILQTHWSFSGAMILMISHGLTSSMLFCLANTTYERTHSRILLLTRGLQPLLPLMATWWLLANLTNMALPP 371
Cdd:MTH00150 251 GHMSLVLAGVLSNTSWGWVGALIMMVSHGFCSSGLFCLANYTYEKVHSRSLFLSKGMLMLYPSLSLWWFLFCIINMAAPP 330
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 372 TTNLMAELTIMIALFNWSVLTIFLTGTATLLTASYTLFMLLTTQRGTSPTHITSLQNSSTREHLLMTLHITPLLLLISKP 451
Cdd:MTH00150 331 SLNLLSEIMIFPSLISYSPWFFVPLGLMVFLSGLYSLYLYTSIQHGGSSSFLKPFNELKSSEMLLLLLHWVPLLLLILKS 410
|
....*.
gi 2772189694 452 EMISGM 457
Cdd:MTH00150 411 DLLFMW 416
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
1-455 |
3.59e-105 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 320.15 E-value: 3.59e-105
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 1 MLKILLPTAMLLPTALLShQKLLWTNTTAHSLLIATISLHWLLPTYYPHKNLTQWMSTDQISSPLLVLSCWLLPLMLLAS 80
Cdd:MTH00014 1 MLKLIMPLISLLLLPLIK-YPWSWALTFSTLLLLSLFTLLNLYPMSAPYSMFTESLSSDMLSAPLITLTLWITALMILAS 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 81 QNHLQHEPPirKRIFITTLITVQPLLLLAFSATELMLFYITFEATLIPTLILITRWGSQPERLSAGIYLLFYTLISSLPL 160
Cdd:MTH00014 80 FKIFQNNKA--PKTFMTNILILNLILLLTFSASNLLMFYIFFEASLIPTLFLILGWGYQPERLQASFYLMIYTVTASLPL 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 161 LVTILYLHTHIGTLHLTMLKLSHPTLtnsWTDLLLSLALLMAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGG 240
Cdd:MTH00014 158 LMSILLIFYTNNSLSMLMSSMEPPSI---YLMNLWWLITILAFMVKMPLYTVHLWLPKAHVEAPVAGSMILAGILLKLGG 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 241 YGIMRLTLLIGPLPPHLHYPFLTLALWGALMTSSICLRQTDLKSLIAYSSVSHMGLVIAASILQTHWSFSGAMILMISHG 320
Cdd:MTH00014 235 YGLLRMSSLFMHINKSLSAPFSSISLVGAVITSLICIRQPDLKSLIAYSSVGHMGLMTAGIMSNTSWGWQGALAMMIAHG 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 321 LTSSMLFCLANTTYERTHSRILLLTRGLQPLLPLMATWWLLANLTNMALPPTTNLMAELTIMIALFNWSVLTIFLTGTAT 400
Cdd:MTH00014 315 LCSSALFALANMTYETTHTRSLFLTKGLLSLFPTMTMWWFLLSAANMAAPPSINLLSEIMLLTSILSSSLSTAILLAITS 394
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*
gi 2772189694 401 LLTASYTLFMLLTTQRGTSPTHITSLQNSSTREHLLMTLHITPLLLLISKPEMIS 455
Cdd:MTH00014 395 FLAAAYSLFLYTSTQHGSPPSFMNPLNLFTPRNHTLMTLHLVPLFILILKPDLIT 449
|
|
| ND4 |
MTH00205 |
NADH dehydrogenase subunit 4; Provisional |
57-454 |
1.62e-102 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214457 [Multi-domain] Cd Length: 448 Bit Score: 313.07 E-value: 1.62e-102
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 57 STDQISSPLLVLSCWLLPLMLLASQNHLqhEPPIRKRIFITTLITVQPLLLLAFSATELMLFYITFEATLIPTLILITRW 136
Cdd:MTH00205 54 SFDSLSLPLIMLSFWISLLMVLASYKVF--KSNKNSKLFTVSVIMLLLILILSFSVDNLLLFYITFEASLIPTLILILGW 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 137 GSQPERLSAGIYLLFYTLISSLPLLVTILYLHTHIGtlHLTMLkLSHPTLTNSWTDLLLSLALLMAFMVKAPLYGLHLWL 216
Cdd:MTH00205 132 GYQPERLQASMYMMMYTLCASLPLLIGLFFLNSLNF--SLSMF-FNFPLNFSDFYLFLYWIFLMLAFLVKLPMYFVHLWL 208
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 217 PKAHVEAPIAGSMLLAALLLKLGGYGIMRLTLLIGPLPPHLHYPFLTLALWGALMTSSICLRQTDLKSLIAYSSVSHMGL 296
Cdd:MTH00205 209 PKAHVEAPVSGSMILAGVLLKLGGYGLIRITSMLYKLNSNFSELFFSISLWGGVMTGMICLRQVDLKSLIAYSSVGHMGL 288
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 297 VIAASILQTHWSFSGAMILMISHGLTSSMLFCLANTTYERTHSRILLLTRGLQPLLPLMATWWLLANLTNMALPPTTNLM 376
Cdd:MTH00205 289 MVVGVFSNTSWGMNGAIIMMVAHGLCSSGMFALANVNYERTNSRSMLMNKGVLNTFPFLVLMWFLLISCNMAAPPSLNLA 368
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2772189694 377 AELTIMIALFNWSVLTIFLTGTATLLTASYTLFMLLTTQRGTSPTHITSLQNSSTREHLLMTLHITPLLLLISKPEMI 454
Cdd:MTH00205 369 SEILLIMSLLSSSKISGIPLSLISFLSGAYSLYLYSQSQHGKVSSQISSFLAISEREYYILILHWFPLNILILKLKIF 446
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
112-400 |
5.36e-74 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 234.13 E-value: 5.36e-74
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 112 ATELMLFYITFEATLIPTLILITRWGSQPERLSAGIYLLFYTLISSLPLLVTILYLHTHIGTLHLTMLKLSHPTLTNSWT 191
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKALTGGLNSSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 192 DLLLSLALLMAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRLTLLIGPLPPHLHYPFLTLALWGALM 271
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAATLVKAGGYGLIRRSLLYLPSSPFIQQILLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 272 TSSICLRQTDLKSLIAYSSVSHMGLVIAASILQTHWSFSGAMILMISHGLTSSMLFCLA-NTTYERTHSRILLLTRGLQP 350
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYGIQAAIFHLLTHGLFSAGLFLCAgSVIYRRVHTRNIRDYGGLAK 240
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|
gi 2772189694 351 LLPLMATWWLLANLTNMALPPTTNLMAELTIMIALFNWSVLTIFLTGTAT 400
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGVVG 290
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
59-448 |
7.01e-71 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 232.28 E-value: 7.01e-71
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 59 DQISSPLLVLSCWLLPLMLLASQNHLQHeppiRKRIFITTLITVQPLLLLAFSATELMLFYITFEATLIPTLILITRWGS 138
Cdd:COG1008 81 DGISLPLVLLTALLTPLAILASWNEIKK----RPKLYYALLLLLEAGMIGVFLALDLFLFYVFWELMLIPMYFLIGIWGG 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 139 qPERLSAGIYLLFYTLISSLPLLVTILYLHTHIGTLHLTMLKLSHPTLTnSWTDLLLSLALLMAFMVKAPLYGLHLWLPK 218
Cdd:COG1008 157 -ERRIYAAIKFFLYTLAGSLLMLVAILALYFLAGALTFDIAELAAAPLP-LTAQLLLFLAFFIAFAVKVPMFPFHTWLPD 234
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 219 AHVEAPIAGSMLLAALLLKLGGYGIMRLTLLIGPLPPHLHYPFL-TLALWGALMTSSICLRQTDLKSLIAYSSVSHMGLV 297
Cdd:COG1008 235 AHVEAPTAGSVLLAGVLLKMGGYGLLRFALPLFPEASAYFAPLLaALGVIGIIYGALVALAQTDLKRLIAYSSVSHMGFV 314
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 298 IAASILQTHWSFSGAMILMISHGLTSSMLFCLANTTYERTHSRILLLTRGLQPLLPLMATWWLLANLTNMALPPTTNLMA 377
Cdd:COG1008 315 LLGIFALNPLGLQGAVLQMVSHGLITAALFLLVGVLYDRTHTRDIADLGGLAKRMPVLAALFLLAALASLGLPGTSGFVG 394
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2772189694 378 ELTIMIALFNWSVLTIFLTGTATLLTASYTLFMLLTTQRGTSPTHITSLQNSSTREHLLMtlhiTPLLLLI 448
Cdd:COG1008 395 EFLVLLGAFQVNPWLAILAALGLILTAAYLLWMYQRVFFGPLKEELAELPDLNPRELAVL----APLAALI 461
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
59-448 |
3.23e-62 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 209.67 E-value: 3.23e-62
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 59 DQISSPLLVLSCWLLPLMLLASQNHLQHeppiRKRIFITTLITVQPLLLLAFSATELMLFYITFEATLIPTLILITRWGS 138
Cdd:PRK05846 81 DGISLLLVVLTALLTPLAVLASWEEIKK----RVKFYMAALLWLEGGVIGVFAALDLLLFYVFFEAMLIPMYFLIGVWGG 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 139 qPERLSAGIYLLFYTLISSLPLLVTILYL----HTHIGTLHL-TMLKLSHPTLTNSWtdllLSLALLMAFMVKAPLYGLH 213
Cdd:PRK05846 157 -KNRIYAATKFFLYTLLGSLLMLVAIIYLvvvyYNATGTFDIaDLLNLPLPPGVQYW----LFLAFFIAFAVKMPMFPLH 231
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 214 LWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRLTLLIGPLPPHLHYPFL-TLALWGALMTSSICLRQTDLKSLIAYSSVS 292
Cdd:PRK05846 232 TWLPDAHVQAPTAGSVLLAGILLKMGAYGLLRFSLPLFPDASHEFAPIIiTLGVIAIIYGALVALAQTDIKKLIAYSSIS 311
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 293 HMGLVIAASILQTHWSFSGAMILMISHGLTSSMLFCLANTTYERTHSRILLLTRGLQPLLPLMATWWLLANLTNMALPPT 372
Cdd:PRK05846 312 HMGFVTLGIFAGNQLGIQGAIFQMISHGLSSAALFLLVGVLYDRLHTRDIADYGGLAKVMPVLAAFFLFFAMASLGLPGT 391
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2772189694 373 TNLMAELTIMIALFNWSVLTIFLTGTATLLTASYTLFMLLTTQRGTSPTHITSLQNSSTREHLLmtlhITPLLLLI 448
Cdd:PRK05846 392 SGFVGEFLILLGSFQVNPVIAFIATTGLILAAVYSLWLYQRVMFGPVKNEVAKLKDLNGRELLI----LLPLVALL 463
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
56-411 |
5.09e-62 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 209.03 E-value: 5.09e-62
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 56 MSTDQISSPLLVLSCWLLPLMLLASQNHLQHeppiRKRIFITTLITVQPLLLLAFSATELMLFYITFEATLIPTLILITR 135
Cdd:TIGR01972 73 LGVDGISLLLVLLTALLTLLAILASWESIQK----RVKEFYALLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYLLIGV 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 136 WGSqPERLSAGIYLLFYTLISSLPLLVTILYLH-THIGTLHLTMLKlshPTLTNSWTDLLLSLALLMAFMVKAPLYGLHL 214
Cdd:TIGR01972 149 WGG-PNRIYAAMKFFLYTLAGSLLMLLAILGLYfLGGGTFDLLELL---NLPLPFGVQTWLFLAFFIAFAVKVPLFPLHT 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 215 WLPKAHVEAPIAGSMLLAALLLKLGGYGIMRLTLligPLPPHLHYPFLTLALW----GALMTSSICLRQTDLKSLIAYSS 290
Cdd:TIGR01972 225 WLPDAHVEAPTAGSVILAGVLLKMGTYGFLRFNL---PLFPDASLYFAPVLAAlgviAIIYGALIALAQTDIKRLIAYSS 301
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 291 VSHMGLVIAASILQTHWSFSGAMILMISHGLTSSMLFCLANTTYERTHSRILLLTRGLQPLLPLMATWWLLANLTNMALP 370
Cdd:TIGR01972 302 ISHMGFVLLGIFSFNELGISGAVFQMISHGLITAALFLLVGVLYERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLP 381
|
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 2772189694 371 PTTNLMAELTIMIALFNWSVLTIFLTGTATLLTASYTLFML 411
Cdd:TIGR01972 382 GTSGFVGEFLILLGSFKVNPVVAFLAALGIVLAAAYMLTLY 422
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
15-448 |
3.40e-60 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 204.14 E-value: 3.40e-60
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 15 ALLSHQKLLWTNTTAHSLLIATISLHWLLPTYYPHKNLTQWMSTDQISSPLLVLSCWLLPLMLLASQNHLQHeppiRKRI 94
Cdd:MTH00204 38 AILFSTLVLWGAFDGEGQFQFINLIEWIISPTLNFQWGPLVFAVDGVSLFFILLTTLLIPICILISWKSIKF----LFKE 113
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 95 FITTLITVQPLLLLAFSATELMLFYITFEATLIPTLILITRWGSQPERLSAGIYLLFYTLISSLPLLVTILYLHTHIGTL 174
Cdd:MTH00204 114 FLLCLLFLEVLLIGVFSVLDLLLFYILFEGILIPMFLLIGIWGSREEKVRASYYFFFYTFAGSVFMLLGIFQLYSITGTT 193
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 175 -HLTMLKLSHPTLTNSWtdllLSLALLMAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRLTLLIGPL 253
Cdd:MTH00204 194 dYQILLNIKLPLSIQKW----LLVGFFLSLAVKIPQIPFHIWLPQAHVEAPVAGSVILAGILLKLGGYGFLRFSWPLFPA 269
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 254 PPHLHYPFLTL-----ALWGALMTSsiclRQTDLKSLIAYSSVSHMGLVIAASILQTHWSFSGAMILMISHGLTSSMLFC 328
Cdd:MTH00204 270 ASEYFAPLIVMlsviaVIYGSLTTC----RQVDFKRLIAYSSVAHMGLVPLGLFTHTIEGLVAAVFLMLAHGFVSSALFI 345
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 329 LANTTYERTHSRILLLTRGLQPLLPLMATWWLLANLTNMALPPTTNLMAELTIMIALFNWSVLTIFLTGTATLLTASYTL 408
Cdd:MTH00204 346 AVTFLYERHHTRLIKYYRGLTLTMPLFVIIMLVLSLANMGFPLSCNFVGEFFSLLAAFEYSLGLGVLVTSGMVWSAAYSL 425
|
410 420 430 440
....*....|....*....|....*....|....*....|
gi 2772189694 409 FMLLTTQRGTSPTHITSLQNSSTREhllmTLHITPLLLLI 448
Cdd:MTH00204 426 YLYNRISFGGGSNYLLFSRDLNRRE----LLAILPLIIAI 461
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
57-433 |
7.59e-55 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 190.52 E-value: 7.59e-55
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 57 STDQISSPLLVLSCWLLPLMLLASQNHLQHeppiRKRIFITTLITVQPLLLLAFSATELMLFYITFEATLIPTLILITRW 136
Cdd:MTH00226 99 AVDGISIYFIILTGFIVPCSILISWHSVKY----LTKSFLICMLILEFLLYAVFSVLDIFMFYILFEGVLIPMYLILGIW 174
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 137 GSQPERLSAGIYLLFYTLISSLPLLVTILYLHT-HIGTLHLTMLKLSH--PTLTNSWtdllLSLALLMAFMVKAPLYGLH 213
Cdd:MTH00226 175 GSREEKMQAAYYFFFYTLIGSVLMLLCLFSLYNiHGTTDYLTLASCSHvvSEQTQKW----IFLGIFLAMAVKIPIFPFH 250
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 214 LWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRLTLLIGPL-PPHLHYPFLTLALWGALMTSSICLRQTDLKSLIAYSSVS 292
Cdd:MTH00226 251 IWLPKAHVEAPVAGSVLLAGILLKLGGYGLVRLSWPILPLgAQNLAPAVIAMGIVGIVYGSFATCRQIDVKRLVAYSSVA 330
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 293 HMGLVIAASILQTHWSFSGAMILMISHGLTSSMLFCLANTTYERTHSRILLLTRGLQPLLPLMATWWLLANLTNMALPPT 372
Cdd:MTH00226 331 HMGLVSITLVTHDIIGLTGSIFIMLAHGIVSSLLFILVTILYDRHHTRLIKYYRGLSITMPIWGTIMIVTSLANVAVPPS 410
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2772189694 373 TNLMAELTIMIALFNWSVLTIFLTGTATLLTASYTLFMLLTTQRGTSPTHITSLQNSSTRE 433
Cdd:MTH00226 411 GNFIGEYLSILSSFNWNPIIGVFVCSGVILSAVYSFYFANRVTFGAPGNLITFARDVNRRE 471
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
59-410 |
5.35e-53 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 184.87 E-value: 5.35e-53
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 59 DQISSPLLVLSCWLLPLMLLASQNhlqhepPIRKRI--FITTLITVQPLLLLAFSATELMLFYITFEATLIPTLILITRW 136
Cdd:MTH00217 79 DGISIFFLILTALLTPICILISWN------SIKFLIkeFLLCLLVIEILLMGVFTILDLVGFYILFEGILIPMFLIIGIW 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 137 GSQPERLSAGIYLLFYTLISSLPLLVTILYLHTHIGTLH---LTMLKLshptltNSWTDLLLSLALLMAFMVKAPLYGLH 213
Cdd:MTH00217 153 GSREEKVQASYYFFFYTFIGSVFMLLGIFTLYSYAGTTDyqaLCCLKI------EKELQYFIFLGFFLSLAIKIPKIPFH 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 214 LWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRLTLLIGPLPPHLHYPF-LTLALWGALMTSSICLRQTDLKSLIAYSSVS 292
Cdd:MTH00217 227 IWLPQAHVEAPVAGSVILAGVLLKLGGYGFIRFSWPLLPEASEYFSPLiQTLSLLAIIYGSLTTCRQVDLKRIIAYSSVA 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 293 HMGLVIAASILQTHWSFSGAMILMISHGLTSSMLFCLANTTYERTHSRILLLTRGLQPLLPLMATWWLLANLTNMALPPT 372
Cdd:MTH00217 307 HMGLVTLGIFSHTIQGLVAAIFLMLAHGLVSSALFIAVTFLYERHHTRLIKYYRGMVITMPLFGILMLLLVLANASIPLS 386
|
330 340 350
....*....|....*....|....*....|....*...
gi 2772189694 373 TNLMAELTIMIALFNWSVLTIFLTGTATLLTASYTLFM 410
Cdd:MTH00217 387 CNFVGEFLSLLAAFEYSYIVGVLASLGMVLSAGYSIYL 424
|
|
| ND4 |
MTH00094 |
NADH dehydrogenase subunit 4; Provisional |
105-412 |
1.18e-44 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177157 [Multi-domain] Cd Length: 403 Bit Score: 160.84 E-value: 1.18e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 105 LLLLAFSATELMLFYITFEATLIPTLILITRWGSQPERLSAGIYLLFYTLISSLPLLVTILYlhthigtlHLTMLKLSHP 184
Cdd:MTH00094 74 ICLLFFVSSNMLMLYMFFELSMFPILIMILGYGSQIEKINSSYYLLFYAAFFSFPFLFVYLK--------NFFFFSLCYF 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 185 TLTNSWTdllLSLALLMAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRltlLIGPLPPHLHYPFLTL 264
Cdd:MTH00094 146 DFFLSWE---MFFILSLSFMMKFPVYFLHLWLPKAHVEAPTTASMLLAGLLLKLGTAGFLR---ILGSLNFVYNNFWIIF 219
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 265 ALWGALMTSSICLRQTDLKSLIAYSSVSHMGLVIAASILQTHWSFSGAMILMISHGLTSSMLFCLANTTYERTHSRILLL 344
Cdd:MTH00094 220 SLLGMILSSFCCVFQSDSKSLAAYSSVTHMSFLLLSLVYMSMSGKLSGLMMMLAHGYTSTLMFYLIGEFYHISKSRLIYF 299
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2772189694 345 TRGLQPLLPLMATWWLLANLTNMALPPTTNLMAELTIMIALFNWSVLTIFLTGTATLLTASYTLFMLL 412
Cdd:MTH00094 300 MNSFFSSSMFFGLIFSLVFLSNSGVPPSLSFFSEFLIISNSFMKNKFSFFFIFFYFLVSFYYSLFLIV 367
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
54-411 |
3.53e-42 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 156.35 E-value: 3.53e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 54 QW-MSTDQISSPLLVLSCWLLPLMLLASQNhLQHEPpirkRIFITTLITVQPLLLLAFSATELMLFYITFEATLIPTLIL 132
Cdd:PRK12561 52 EWsLGVDGLSMPLVLLSGLITTLSIFASWK-VTRKP----RLFYFLMLVLYSAQIGVFLAQDLLLFFLMWELELVPVYLL 126
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 133 ITRWGSQpERLSAGIYLLFYTLISSLPLLVTILYLHTHIG--TLHLTMLKLSHPTLtnsWTDLLLSLALLMAFMVKAPLY 210
Cdd:PRK12561 127 ISIWGGQ-KRLYAATKFILYTALASIFILVAGLALALSGDtfTFDLAELGAKSYPL---ALELLLYAGFLIAFGVKLPIF 202
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 211 GLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRLTLLIGPlPPHLHYPFLTLAL------WGALMTssicLRQTDLKS 284
Cdd:PRK12561 203 PLHTWLPDAHGEASAPVSMILAGVLLKMGGYALIRFNVQMLP-DAHVYFAPALAILgvvniiYGALNA----FAQDNVKR 277
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 285 LIAYSSVSHMGLVIAASILQTHWSFSGAMILMISHGLTSSMLFCLANTTYERTHSRILLLTRGLQPLLPLMATWWLLANL 364
Cdd:PRK12561 278 RLAYSSVSHMGFVLLGIAAFTDLGISGAMLQMISHGLIAAALFFLTGVTYERTHTLSIPNMGGLAKVMPKTFALFTASSM 357
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....
gi 2772189694 365 TNMALPPTTNLMAELTIMIALFN-------WSVLTIFLTGTATLLTASYTLFML 411
Cdd:PRK12561 358 ASLALPGMSGFVSELTVFLGITSsdvysstFRTITILLAAVGLILTPIYLLSML 411
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
59-402 |
1.02e-36 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 139.90 E-value: 1.02e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 59 DQISSPLLVLSCWLLPLMLLASQNHLQHEPpiRKRIFITTLITVQPLLLLAFSATELMLFYITFEATLIPTLILITrWGS 138
Cdd:COG0651 75 DRLSALFLLLTALVALAVLLYSIGYMRHER--RGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVA-LGG 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 139 QPERLSAGIYLLFYTLISSLPLLVTILYLHTHIGTLHLTMLKLSHPTLTNSWTdLLLSLALLMAFMVKAPLYGLHLWLPK 218
Cdd:COG0651 152 TKEALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLAARLAELDPGLL-LAAFALLLVGFGIKAALFPLHFWLPD 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 219 AHVEAPIAGSMLLAALLLKLGGYGIMRLTLLIGPLPPH--LHYPFLTLALWGALMTSSICLRQTDLKSLIAYSSVSHMGL 296
Cdd:COG0651 231 AYPAAPSPVSALLSGLLTKVGVYAILRVLTLLFGADPAlfLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIGY 310
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 297 VIAASILQTHWSFSGAMILMISHGLTSSMLFCLANTTYERTHSRILLLTRGLQPLLPLMATWWLLANLTNMALPPTTNLM 376
Cdd:COG0651 311 ILLGLGLGTPLGLAGALFHLLNHALAKALLFLAAGAIERATGTRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSGFV 390
|
330 340 350
....*....|....*....|....*....|
gi 2772189694 377 AELTIMIALFN----WSVLTIFLTGTATLL 402
Cdd:COG0651 391 SKWLLLQAALEagawLLAAVLLLSSLLTLA 420
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
56-411 |
1.13e-32 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 129.43 E-value: 1.13e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 56 MSTDQISSPLLVLSCWLLPLMLLASQNHLQheppiRKRIFITTLITVQPLLLLAFSATELMLFYITFEATLIPTLILITR 135
Cdd:PRK06473 75 LGVDGLSLPLLVLNSLLTLIAIYSSDESIQ-----RPRFYYSLLLLLNAGVSGAFLAQDLLLFFLFYELELIPLYLLIAI 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 136 WGSQpERLSAGIYLLFYTLISSLPLLVTILYLHTHIGTLHLTMLKLSHPTLTNSwTDLLLSLALLMAFMVKAPLYGLHLW 215
Cdd:PRK06473 150 WGGQ-RRGYAATKFLLYTAISGILILVSFLGLVWLSGASSFDYEPLRSHTLPLS-TQLLLLAPILVGFGIKIPLVPFHTW 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 216 LPKAHVEAPIAGSMLLAALLLKLGGYGIMRLTLLIGPLPPHLHYPFL-TLALWGALMTSSICLRQTDLKSLIAYSSVSHM 294
Cdd:PRK06473 228 LPDAHVEASTPVSVLLAGVLLKLGTYGLLRFGVGLFPEAWVYLAPWLaTWAVVSVLYGASCAIAQKDMKKMVAYSSIGHM 307
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 295 GLVIAASILQTHWSFSGAMILMISHGLTSSMLFCLANTTYERTHSRILLLTRGL---QPLLPLMATWWLLANLTNMALPP 371
Cdd:PRK06473 308 GYILLAAAAATPLSILAAVFQMISHGLISALLFLLVGVVYKKTGSRDVDVLRGLlnpERGLPITGSLMILGVMASAGIPG 387
|
330 340 350 360
....*....|....*....|....*....|....*....|
gi 2772189694 372 TTNLMAELTIMIALFNWSVLTIFLTGTATLLTASYTLFML 411
Cdd:PRK06473 388 MVGFIAEFLVFRGSFPIFPVQTLLCMIGTGLTAVYFLLLV 427
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
45-411 |
2.70e-32 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 128.67 E-value: 2.70e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 45 TYYPHKNLTQWMSTDQISSPLLVLSCWLLPLMLLASQnhlqhepPI--RKRIFITTLITVQPLLLLAFSATELMLFYITF 122
Cdd:PRK02546 72 SWLPQLGLTWSVGADGLSMPLILLTGFITTLAVLAAW-------PVtfKPKLFYFLMLAMYGGQIAVFAVQDMLLFFLAW 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 123 EATLIPTLILITRWGSQpERLSAGIYLLFYTLISSLPLLVTILYLHTHIGTLHLTMLKLSHPTLTNSWtDLLLSLALLMA 202
Cdd:PRK02546 145 ELELIPVYLLLAIWGGK-KRQYAATKFILYTAGSSLFILLAALAMAFYGDTPTFDMTALAAKDFGLGF-QLLCYAGLLIA 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 203 FMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRLTLLIGPLPPHLHYPFL-TLALWGALMTSSICLRQTD 281
Cdd:PRK02546 223 YGVKLPIVPLHTWLPDAHGEATAPVHMLLAGILLKMGGYALLRMNAGMLPDAHAQFAPLLiVLGVVNIIYAALTSFAQRN 302
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 282 LKSLIAYSSVSHMGLVIAASILQTHWSFSGAMILMISHGLTSSMLFCLANTTYERTHSRILLLTRGLQPLLPLMATWWLL 361
Cdd:PRK02546 303 LKRKIAYSSISHMGFVLIGIGSFTDLGTSGAMLQMISHGLIGASLFFLVGATYDRTHTLMLDEMGGVGQKMRKMFAMWTA 382
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*..
gi 2772189694 362 ANLTNMALPPTTNLMAELTIMIAL-------FNWSVLTIFLTGTATLLTASYTLFML 411
Cdd:PRK02546 383 CSLASLALPGMSGFVAELMVFVGFatsdaytLPFRVVVVFLAAVGVILTPIYLLSML 439
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
95-411 |
1.10e-29 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 120.82 E-value: 1.10e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 95 FITTLITV--QPL---------LLLA--------FSATELMLFYITFEATLIPTLILITRWGSQpERLSAGIYLLFYTLI 155
Cdd:CHL00011 95 FITTLATLaaWPVtrnsrlfyfLMLAmysgqiglFSSRDLLLFFIMWELELIPVYLLLSMWGGK-KRLYSATKFILYTAG 173
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 156 SSLPLLVTILYL---HTHIGTLHL-TMLKLSHPTLTnswtDLLLSLALLMAFMVKAPLYGLHLWLPKAHVEAPIAGSMLL 231
Cdd:CHL00011 174 GSIFLLIGVLGMglyGSNEPTLNFeTLANQSYPVAL----EILFYIGFLIAYAVKLPIIPLHTWLPDTHGEAHYSTCMLL 249
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 232 AALLLKLGGYGIMRLTLligPLPPHLHYPFLT-LALWGALM---TSSICLRQTDLKSLIAYSSVSHMGLVIAASILQTHW 307
Cdd:CHL00011 250 AGILLKMGAYGLIRINM---ELLPHAHSIFSPwLVIVGAIQiiyAASTSLGQRNLKKRIAYSSVSHMGFIIIGIGSITDT 326
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 308 SFSGAMILMISHGLTSSMLFCLANTTYERTHSRILLLTRGLQPLLPLMATWWLLANLTNMALPPTTNLMAELTIMIA--- 384
Cdd:CHL00011 327 GLNGAILQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGIAIPMPKIFTMFSSFSMASLALPGMSGFVAELIVFFGiit 406
|
330 340 350
....*....|....*....|....*....|.
gi 2772189694 385 ----LFNWSVLTIFLTGTATLLTASYTLFML 411
Cdd:CHL00011 407 sqkyLLMPKILITFVMAIGMILTPIYLLSML 437
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
59-411 |
5.29e-28 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 116.35 E-value: 5.29e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 59 DQISSPLLVLSCWLLPLMLLASQNHLQheppiRKRIFITTLITVQPLLLLAFSATELMLFYITFEATLIPTLILITRWGS 138
Cdd:PRK07363 78 DGLSLPLLVLNSLLTWIAIYSIGENTE-----RPRLYYSLILLINGGIAGALLAQNLLLFFLFYELELIPFYLLIAIWGG 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 139 QpERLSAGIYLLFYTLISSLPLLVTILYLHTHIGTLHLTMLKLSHPTLTNSwTDLLLSLALLMAFMVKAPLYGLHLWLPK 218
Cdd:PRK07363 153 E-KRGYASIKFLIYTAVSGLLVLAAFLGIVWLSGSTSFDYDAISTQNLSLN-TQLILLTGLLLGFGIKIPLVPLHTWLPD 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 219 AHVEAPIAGSMLLAALLLKLGGYGIMRLTLLIGPLPPHLHYPflTLALWGA---LMTSSICLRQTDLKSLIAYSSVSHMG 295
Cdd:PRK07363 231 AYTEASPAVAILLGGVLAKLGTYGLLRFGLQLFPQTWSLVAP--GLAIIGTisvIYGALSAIAQKDIKRMVAYSSIGHMG 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 296 LVIAASILQTHWSFSGAMILMISHGLTSSMLFCLANTTYERTHSRILLLTRGL-QPL--LPLMATWWLLANLTNMALPPT 372
Cdd:PRK07363 309 YILVAAAAGTQLSLLGAVAQMISHGLILALLFHLVGIVERKVGTRDLDVLNGLmNPIrgLPLTSALLVLAGMASAGIPGL 388
|
330 340 350
....*....|....*....|....*....|....*....
gi 2772189694 373 TNLMAELTIMIALFNWSVLTIFLTGTATLLTASYTLFML 411
Cdd:PRK07363 389 VGFVAEFIVFQGSFSTFPIPTLLCIVASGLTAVYFVILL 427
|
|
| Oxidored_q5_N |
pfam01059 |
NADH-ubiquinone oxidoreductase chain 4, amino terminus; |
1-109 |
7.30e-24 |
|
NADH-ubiquinone oxidoreductase chain 4, amino terminus;
Pssm-ID: 366442 [Multi-domain] Cd Length: 110 Bit Score: 95.67 E-value: 7.30e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 1 MLKILLPTAMLLPTALLSHQKLLWTNTTAHSLLIATISLHWLL-PTYYPHKNLTQWMSTDQISSPLLVLSCWLLPLMLLA 79
Cdd:pfam01059 1 MLKILLPTLMLIPLTFLSKPKWLWTTSTLYSLLLALLSLLLLNnPSNFSWSNLSYFLGIDSLSYPLIILSCWLLPLMILA 80
|
90 100 110
....*....|....*....|....*....|
gi 2772189694 80 SQNHLQHEPPIRKRIFITTLITVQPLLLLA 109
Cdd:pfam01059 81 SQKHLKSEPNNRQRTFIFLLILLQLFLILT 110
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
109-406 |
8.45e-19 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 88.78 E-value: 8.45e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 109 AFSATELMLFYITFEATLIPTLILITRwGSQPERLSAGIYLLFYTLISSLPLLVTILYLHTHIGTLHLTMLK---LSHPT 185
Cdd:PRK08375 122 ALLTADLFNLFVFLEIMSLSSYALVAM-GGDRRALAAARKYLIVGLIGSTFLLIGVGLLYGVTGTLNMADLAgalAENPT 200
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 186 LTnswtdlLLSLALLMAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRLTLLI----GPLPPHLHYPF 261
Cdd:PRK08375 201 VV------TAFGFVLLALALKAAVFPLHTWLPRAYPAAPPVVTALLSGLVTKVAVYALIRIYFTVfggdFRFALGLGWLL 274
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 262 LTLALWGALMTSSICLRQTDLKSLIAYSSVSHMGLVIAASILQTHWSFSGAMILMISHGLTSSMLFCLANTTYERTHSRI 341
Cdd:PRK08375 275 AVLALLSMLVGSLAALGQDDVKRVLAYSTVSQMGYILLGLALLTPLALAAGLLHLLHHALMKGALFLAAGAIEVTYGTRR 354
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2772189694 342 LLLTRGLQPLLPLMATWWLLANLTNMALPPTTNLMAELTIMIALF---NWSVLTIFLtgTATLLTASY 406
Cdd:PRK08375 355 LSELSGLGRRMPLTAAAFAVASLSLIGVPPTSGFVSKWYLVVGAVeagQWLVLAVLL--ASSLLALLY 420
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
59-409 |
1.79e-18 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 87.72 E-value: 1.79e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 59 DQISSPLLVLSCWLLPLMLLASQNHLQHEPPIRkrIFITTLITVQPLLLLAFSATELMLFYITFEATLIPTLILITRWGS 138
Cdd:PRK12667 81 DLLGALLGLLTALVMFLILIYSYWYLEHESGPE--WYYTLLLGLEAGMLGILLTGDAFNLFVMLEVLSISAYGLVAYYRD 158
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 139 QPERLSAGIYLLFYTLISSLPLLVTILYLHTHIGTLHLTMLKL----------SHPTLTNSWTDLLLSLALLMAFMVKAP 208
Cdd:PRK12667 159 RGDAVEAAIKYALIGAVGTTLYFLALAFLYATFGTLNMADLSAkirglsfpltGGLAGNPPLALGVALALALWAFTIKAA 238
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 209 LYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRLTLLI-------GPLPPHLHYPFLTLALWGALMTSSICLRQTD 281
Cdd:PRK12667 239 IFPNHFWLPDAHPAAPSPVSAMLSGLVVNVGAYAIIRFLYTIfgispslIDFRAALSPILIILGAVSAIIGALMMVVQKD 318
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 282 LKSLIAYSSVSHMGLVIAASILQTHWSFSGAMILMISHGLTSSMLFCLANTTYERTHSRILLLTRGLQPLLPLMATWWLL 361
Cdd:PRK12667 319 VKRLLAYSTISHMGYIFMGIGIGTQLGLAAALFHIINHAIAKSLLFLASGVFIHAAGTRDIDELAGLGRKMPIASFAFLI 398
|
330 340 350 360
....*....|....*....|....*....|....*....|....*...
gi 2772189694 362 ANLTNMALPPTTNLMAELTIMIALFNWSvltIFLTGTATLLTASYTLF 409
Cdd:PRK12667 399 GALSLVGIPPLNGFFSKLLLFNALLESG---FYLPALVLLIASAISLV 443
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
91-423 |
4.09e-16 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 80.38 E-value: 4.09e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 91 RKRIFITTLITVQPLLLLAFSATELMLFYITFEATLIPTLILITrWGSQPERLSAGIYLLFYTLISSLPLLVTILYLHTH 170
Cdd:PRK07234 92 KTRFFYAQLLILHGSVNAAFVCADLISLYVALEVLSIATFLLVA-YPRTDRAIWVGLRYLFYSNVAMLFYLIGAVLVYQA 170
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 171 IGTLHLTMLKLSHPTltnswtdllLSLALLMAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRLTLLI 250
Cdd:PRK07234 171 NGTFAFSGLATADPE---------AFALIALGLLVKGGIFVSGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRCALDV 241
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 251 GPLPPHLHYpfltLALWGALMTSSICLRQTDLKSLIAYSSVSHMGLVIAASILqthwsfsgAMILMISHGLTSSMLFCLA 330
Cdd:PRK07234 242 PGLDLIVRI----FGVGTALLGVLFALLEKDLKRMLAFSTISQLGFILAAPLV--------GGLYALAHGLVKSTLFLCA 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 331 NTTYERTHSRILLLTRGLQPLLPLmatwwLLANLTNMALPPTTNLMAELTIMIALFNWSVltIFLTGTATLLTASYTLFM 410
Cdd:PRK07234 310 GALPSRNFTELISQMLGIGKWIPL-----TMASFSIAGFPLLAGFVSKVLTLKNLLPWQA--IALNLAAVGTAASFWKFI 382
|
330
....*....|...
gi 2772189694 411 LLTTQRGTSPTHI 423
Cdd:PRK07234 383 FLPFSADDEDKKP 395
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
59-386 |
4.99e-14 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 74.38 E-value: 4.99e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 59 DQISSPLLVLSCWLLPLMLLASQNHLQHEPPIRKRIFITTLITVQPLLLLAFSATELMLFYITF-EATLIPTLILITRWG 137
Cdd:PRK08667 76 DRLAAFFIILIGLVSLCVAIYSLGYNEHMSSNERANLLSALTALFILSMLGVVASANTFSFLFFwEIMALSSFFLVMNDY 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 138 SQPERLSAGIYLLFYTLISSLPLLVTILYLHTHIGTLHLTMLKLSHPTLTNSWtdlllsLALLMAFMVKAPLYGLHLWLP 217
Cdd:PRK08667 156 QEEETQRAGIFYFVMTQLSTVFLMLGIIVLFIQTGSFELSPLGASAGILSLVF------LLLFLGFGIKAGIIPFHKWLP 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 218 KAHVEAPIAGSMLLAALLLKLGGYGIMRltLLIGPLPPHLHYPFLTLAL--WGALMTSSICLRQTDLKSLIAYSSVSHMG 295
Cdd:PRK08667 230 YAHPASPSNVSALMSGVMLKVAVYGLVR--FLMDVLSPELWWGVLILLAgsISALLGVIYALKEHDLKGLLAYSSIENIG 307
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 296 LVIAASILQTHW-----------SFSGAMILMISHGLTSSMLFCLANTTYERTHSRILLLTRGLQPLLPLMATWWLLANL 364
Cdd:PRK08667 308 IILMGIGLYVIFgvygldtlallALGGALFHSLNHALFKSLLFLTAGSVVHATGTRNIEKMGGLVKLMPYTSALFLVGAV 387
|
330 340
....*....|....*....|..
gi 2772189694 365 TNMALPPTTNLMAELTIMIALF 386
Cdd:PRK08667 388 SIAALPPFNGFASELLLYESFF 409
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
108-403 |
9.07e-13 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 70.00 E-value: 9.07e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 108 LAFSATELMLFYITFEATLIPTLILITRWGSqPERLSAGIYLLFYTLISSLPLLVTILYLHTHIGTLHLTMLKLSHPTLT 187
Cdd:PRK12665 126 NAFLAGDLFNLYVGFEILLVASYVLLTLGAT-AARVRAGVTYVMVSMVSSLLFLIGIALVYAATGTLNMADLAVRLDELP 204
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 188 nSWTDLLLSLALLMAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRLTLLIGPlpphlHYPFLTLALW 267
Cdd:PRK12665 205 -SGTRTALFAVLLVAFGIKAAVFPLSFWLPDSYPTAPAPVTAVFAGLLTKVGVYAIIRTHTLLFP-----GGGLDTLLMV 278
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 268 GALMTSSI----CLRQTDLKSLIAYSSVSHMGLVIAASILQTHWSFSGAMILMISHGLTSSMLFCLANTTYERTHSRILL 343
Cdd:PRK12665 279 VALLTMVVgilgAIAQSDIKRLLSFTLVSHIGYMVFGIALSTVAGLSGAIYYVAHHITVQTTLFLVVGLIERQAGSSSLR 358
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2772189694 344 LTRGLQPLLPLMATWWLLANLTNMALPPTTNLMAELTIMIA-LFNWSVLTIFLTGTAT---LLT 403
Cdd:PRK12665 359 RLGGLAKASPLLAVLFFVPALNLGGIPPFSGFIGKVALLEAgAEDGTWLAWALVAGGVvtsLLT 422
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
206-447 |
3.30e-12 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 68.42 E-value: 3.30e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 206 KAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRLTLLI-----GPLPPHLhypFLTLALWGALMTSSICLRQT 280
Cdd:PRK06458 227 KVGLFPMHAWLPDAHSEAPSPVSALLSGVLLNVALYAVLRYYILIdaaigSDFPGRL---LLIFGLLSVLVAAFFLLRQR 303
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 281 DLKSLIAYSSVSHMGLVIAASILQTHWSFSGAMILMISHGLTSSMLFCLANTTYERTHSRILLLTRGLQPLLPLMATWWL 360
Cdd:PRK06458 304 DIKRLFAYSSIEHMGLIAFALGIGGPLGIFAALLHMLNHSLTKSAIFFASGNVLQKYGTRDINVIRGLLKVSPLTGWGLM 383
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 361 LANLTNMALPPTTNLMAELTIMIALFNWSVLTIFLTGTATLLTASYTLFMLLTTQRGTSPTHITSLQNSSTREHLLMTLH 440
Cdd:PRK06458 384 LGALAIAGMPPFGVFISEFLILTAGLARGPLLIAILLLLLLTLAFAALVRRVAGMVFGEPPEAVNRGDLGWLTTSPMFVH 463
|
....*..
gi 2772189694 441 ITPLLLL 447
Cdd:PRK06458 464 LVLVLVL 470
|
|
| ND4 |
MTH00062 |
NADH dehydrogenase subunit 4; Provisional |
107-395 |
1.62e-11 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214413 [Multi-domain] Cd Length: 417 Bit Score: 65.71 E-value: 1.62e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 107 LLAFSATELMLFYITFEATLIPTLILITRWGSQPERLSAGIYLLFYTLISSLPLLVTILYLHTHIGTLHltmlkLSHPTL 186
Cdd:MTH00062 85 ILCFCVNNSLLFWFFYELSIIPLLYLLFSESPYSERYLASWYFLGYLLLTSLPLLLCLLYLSLVNGSFN-----FSDWGS 159
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 187 TNSWTDLLLSLALLMaFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRLTLLIGPLPPHLHYPFLTLAL 266
Cdd:MTH00062 160 DDSVSLIVYYVLSFM-FITKVPLFPFHTWLPIVHAEASSPVSIFLSGYIMKLGLLGVYRFCGFIFSGSFLGYLFLCCLFS 238
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 267 WGALMTSSICLrqtDLKSLIAYSSVSHMglVIAASILQTHWSFSGAMILMIS--HGLTSSMLFCLANTTYERTHSRILLL 344
Cdd:MTH00062 239 VFFLITACSEL---DGKRWLAFLSLSHI--LVPVLGLFVGDWSSINLSFFYClgHGLSAGLVFLLLWCFYEVSGSRNWVL 313
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|.
gi 2772189694 345 TRGLQPLLPLMATWWLLANLTNMALPPTTNLMAELTIMIALFNWSVLTIFL 395
Cdd:MTH00062 314 LKSGINGSLVLRVIVVFSFLSLCSFPPTIQFFCEVFLVSSSFGVLVYLLFW 364
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
213-401 |
4.56e-11 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 64.94 E-value: 4.56e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 213 HLWLPKAhVEAPIAGSMLLAALLLKLGG-YGIMRLTLLIGPLPPHlhypFLTLALWGA---LMTSSICLRQTDLKSLIAY 288
Cdd:PRK12647 215 HFWLPNA-MEAPTPVSAYLHSATMVKAGiYLLARLNPVLGGTPLW----QTILPLFGGltmLTGALLAVRQTDLKLILAY 289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 289 SSVSHMGLVIAASILQTHWSFSGAMILMISHGLTSSMLFCLANTTYERTHSRILLLTRGLQPLLPLMATWWLLANLTNMA 368
Cdd:PRK12647 290 STVSALGTLVMLLGLGSELAIKAAVLFLVAHSLYKGALFMVAGIIDHETGTRDITKLGGLRRAMPITAAAALLAALSMAG 369
|
170 180 190
....*....|....*....|....*....|...
gi 2772189694 369 LPPTTNLMAELTIMIALFNWSVLTIFLTGTATL 401
Cdd:PRK12647 370 LPPLFGFLAKELIYEALLEAPLWSLILTVAAVL 402
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
105-448 |
1.38e-10 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 63.62 E-value: 1.38e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 105 LLLLAFS------ATELMLFYITFEATLIPTLILITRWGSQPERLSAGIYLLFYTLISSLPLLVTILYLHTHIGTLHLTM 178
Cdd:PRK12646 116 LTLFMFSmigivlSDNTILMYVFWELTSVSSFLLISYWYNNGDSQFGAIQSFMITVFGGLALLVGFIMLYIMTGTNNITE 195
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 179 LKLSHPTLTNSWTDLLLSLALLMAFMVKAPLYGLHLWLPKAhVEAPIAGSMLLAALLLKLGG-YGIMRLTLLIGpLPPHL 257
Cdd:PRK12646 196 ILGQADHIKNHGLFIPMIFMFLLGAFTKSAQFPFHIWLPRA-MAAPTPVSAYLHSATMVKAGiFLLFRFTPLLG-LSNMY 273
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 258 HYPFLTLALWGALMTSSICLRQTDLKSLIAYSSVSHMGLVIAASIL------QTHWSFS--------GAMILMISHGLTS 323
Cdd:PRK12646 274 IYIVTFVGLITMLFGSITALKQWDLKGILAYSTISQLGMIMAMVGIgggyaqHQQDAIAsiyvfvlfAALFHLMNHAIFK 353
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 324 SMLFCLANTTYERTHSRILLLTRGLQPLLPLMATWWLLANLTNMALPPTTNLMAELTIMIALFNWSVLTIF-LTGT---- 398
Cdd:PRK12646 354 CALFMGVGIIDHEAGTRDIRILSGMRQLFPKMNLVMTIAALSMAGVPFLNGFLSKEMFLDALTQTGQLSQFsLISMiiiv 433
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*
gi 2772189694 399 -----ATLLTASYTLFMLLTTQRGtsPTHITSLQNSSTREHLLMTLHITPLLLLI 448
Cdd:PRK12646 434 figviASIFTFTYALYMVKEVFWG--KYDSKVFTKKNIHEPWLFSLPSLILMVLV 486
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
108-402 |
3.94e-10 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 61.53 E-value: 3.94e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 108 LAFSATELMLFyITFEATLIPTLILITRWGSqPERLSAGIYLLFYTLISSLPLLVTILYLHTHIGTLHLTMLKLSHPTLT 187
Cdd:PRK06525 129 LVYSSTLLGLL-LFFEITGLCSWALISYYQS-PKALRSALKALLITHIGSLGLYLAAATLFLQTGTFALSALSGLHGSLK 206
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 188 nswtdLLLSLALLMAFMVKAPLYGLHLWLPKAhVEAPI-------AGSMLLAalllklGGYGIMRLTLLIGPLPPHLHYP 260
Cdd:PRK06525 207 -----YLVFLGILFAAWGKSAQLPFYSWLPDA-MEAPTpasaylhAASMVKV------GVYIFARAIQSMGPIPHVIGYV 274
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 261 FLTLALWGALMTSSICLRQTDLKSLIAYSSVSHMGLV---IAASILQTHWSFSGAMILMISHGLTSSMLFCLANTTYERT 337
Cdd:PRK06525 275 GAVMAIVTLLYGFLMYLPQQDMKRLLAYSTITQLGYMffgLSLAILGSRLALEGSIAYIFNHAFAKSLFFLVAGALSYSC 354
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2772189694 338 HSRILLLTRGLQPLLPLMATWWLLANLTNMALPPTTNLMAELTIMIALFNWSVLTIFLTGTATLL 402
Cdd:PRK06525 355 GTRLLPRLRGVLKKLPLVGVGFCVAALAITGVPPFNGFFSKFPIFAAGFELSVEYWILLPAMVLL 419
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
109-401 |
4.03e-10 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 61.89 E-value: 4.03e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 109 AFSATELMLFYITFEATLIPTLILITRWGSQPERLSAGIYLLFyTLISSLPLLVTILYLHTHIGTLHLTML--KLSHPTL 186
Cdd:PRK07691 124 AFLTGDIFNLFVFFEVMLMASYVLIVIGGTKIQLRESIKYVLI-NVVSSAFFVVAVAILYSVVGTLNMADIsvKIAELSA 202
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 187 TNSWTDLLLSLALLMAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMR-LTLLIGPLPPHLHYPFLTLA 265
Cdd:PRK07691 203 GQTGLITVVAILFLFVFATKAGLFPLYFWLPGSYYAPPIAIAALFGALLTKVGVYAIARtFTLFFSHDTSFTHYLILILA 282
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 266 LWGALMTSSICLRQTDLKSLIAYSSVSHMGLVIAASILQTHWSFSGAMILMISHGLTSSMLFCLANTTYERTHSRILLLT 345
Cdd:PRK07691 283 LLTIIFGVIGAVAYFDIKKIIIYNIMIAVGVILVGVAMMTESGMIGAIYYLIHDMIVKAALFLLIGIMIKITGTTDLKKM 362
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 346 RGLQPLLPLMATWWLLANLTNMALPPTTNLMAELTIMIALFN----WSVLTIFLTGTATL 401
Cdd:PRK07691 363 GGLIKRYPVLGWMFFIAALSLAGIPPLSGFYGKFFIVEGTFEagfyVSGIIVLLSSLLVL 422
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
105-372 |
4.39e-10 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 61.98 E-value: 4.39e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 105 LLLLAFSATELML--------FYITFEATLIPTLILITRWGSQPErlSAGIYLLFYTLISSLPLLVTILYLHTHIGTLHL 176
Cdd:PRK12650 114 LLMTAFMAAMLLLvladdvvvLFVAWELVSLASFFLIARSGSGGE--AGSIRTLILTFFGGLTLLAAVAIAATQTGTTSL 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 177 TMLKLS-----HPTLTnswtdLLLSLALLMAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRLTLLIG 251
Cdd:PRK12650 192 SGILHSdvwaeKPGLT-----TVVAVLIAVAAFTKSAQFPFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSPVFH 266
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 252 PLPPhLHYPFLTLALWGALMTSSICLRQTDLKSLIAYSSVSHMGLVIAASILQTHWSFSGAMILMISHGLTSSMLFCLAN 331
Cdd:PRK12650 267 DVAV-WNWLLIIVGMITALMGAVFAVQKTDLKKLTAYSTVSQLGWIVATIGVGTPFALTAAVVHTLAHALFKSSLFMLIG 345
|
250 260 270 280
....*....|....*....|....*....|....*....|.
gi 2772189694 332 TTYERTHSRILLLTRGLQPLLPLMATWWLLANLTNMALPPT 372
Cdd:PRK12650 346 VVDHQAGTRDIRRLGSLWRRMPFTFVSVTIAALSMAAVPPL 386
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
115-423 |
4.45e-10 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 61.71 E-value: 4.45e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 115 LMLFYITFEATLIPTLILITRWGSQPERLSAGIYLLFYTLISSLPLLVTILYLHTHIGTLHLTMLKLSHPTLTNSWTDLL 194
Cdd:COG1009 133 LLLLFVFWELVGLCSYLLIGFWYEKPSARRAARKAFLVTRVGDLGLLLGILLLGAIAGTLNFSELLAAAPTILSSPLLTL 212
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 195 LSLALLMAFMVKAPLYGLHLWLPKAhVEAPI-------AGSMLLAalllklGGYGIMRLTLLIGpLPPHLHYPFLTLALW 267
Cdd:COG1009 213 ILLLLLLGAFGKSAQFPLHFWLPDA-MEGPTpvsallhAATMVKA------GVYLLARLSPLFA-LSPVWLTVVAIIGAI 284
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 268 GALMTSSICLRQTDLKSLIAYSSVSHMGLVIAASILQthwSFSGAMILMISHGLTSSMLFCLANTTYERTHSRILLLTRG 347
Cdd:COG1009 285 TALFAALIALAQTDIKRVLAYSTVSQLGYMFLALGVG---AYVAALFHLLTHAFFKALLFLGAGSVIHATGTRDIRKMGG 361
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 348 LQPLLPLMATWWLLANLTNMALPPTTNLMAELTIMIALFNWSVLTIFLTGTATL---LTASYTLFMLLTT----QRGTSP 420
Cdd:COG1009 362 LRKKMPITAITFLIGALSLAGIPPFAGFFSKEAILEAALEAGGLGPLLLAVALLgafLTAFYSFRLFFLVffgkPRPKTP 441
|
...
gi 2772189694 421 THI 423
Cdd:COG1009 442 KHP 444
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
97-407 |
6.76e-10 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 60.88 E-value: 6.76e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 97 TTLITVQPLLLLAFSAT-ELMLFYITFEATLIPTLILITRWGSQPERLSAGIYLLFYTLISSLPLLVTILYLHTHIGTLH 175
Cdd:PRK08376 124 YTLILLLELGMLGMAITgDLFNFFVFLEIMSIASYALVAFRNDTWEAIEAGIKYMFVGSLASSMVLLGIALLYGQYGTLN 203
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 176 LTMLKlSHPTLTNSWTDLLLSLALLMAFMVKAPLYGLHLWLPKAHVEAPiAGSMLLAALLLKLGGYGIMRLTL-LIGPL- 253
Cdd:PRK08376 204 MAYLA-VKMSENPTVVAKIALALFIAGLAMKSGAVPVHMWLPDAYPAAP-SSISAMLLVIKQAGLYALARVLFsIYGPAi 281
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 254 -PPHLHYPFLTLALWGALMTSSICLRQTDLKSLIAYSSVSHMG---------LVIAASILQTHWSF---SGAMILMISHG 320
Cdd:PRK08376 282 nLATVGWVIIILGCLTMFVGVAMAVVQKDVKRLLAYHSVSQIGymllglgvgLAALGDPAMASYGEialAGGIYHIVNHA 361
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 321 LTSSMLFCLANTTYERTHSRILLLTRGLQPLLPLMATWWLLANLTNMALPPTTNLMAELTIM--IALFNwSVLTIFLTGT 398
Cdd:PRK08376 362 LYKALLFLTAGAVIYETGTRNLNELGGLARTMPKTTIAFLIGAAAIVGLPPFNGFASKWLIYesSALFN-PILGVIAMIG 440
|
....*....
gi 2772189694 399 ATLLTASYT 407
Cdd:PRK08376 441 SVLTLASFV 449
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
108-420 |
7.91e-10 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 60.92 E-value: 7.91e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 108 LAFSATELMLFYITFEATLIPTLILITRWGSQpERLSAGIYLLFYTLISSLPLLVTILYLHT------HIGTLHLTMLKL 181
Cdd:PRK08676 117 FAFFSDNLALFWIFAELTTVFSAMLIAILSAR-ENIDAALKYIFIASTAMIFAFIGLIFLFSltrqalGTGTLNWTELAA 195
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 182 SHPTLTNSWTdLLLSLALLMAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRLTLLI--GPLPPHLHY 259
Cdd:PRK08676 196 HASLLSPSVL-GASFLFIFIGFLAKSGLVPFHTWLPAAYAKAPSVVSALLSGTVLNIGIYGILRLSALLrqSGAAEQFSN 274
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 260 PFLTLALWGALMTSSICLRQTDLKSLIAYSSVSHMGLVIAASILQTHWSFSGAMILMISHGLTSSMLFCLANTTYERTHS 339
Cdd:PRK08676 275 VLIGLGIFSIAVAAFSMLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFWMLFHMLAHSLVKSGLFFSAGILHRQYRS 354
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 340 RILLLTRGLQPLLPLMATWWLLANLTNMALPPTTNLMAELTIMIALFNWSVLTIFLTGTATLLTASYTLFMLLTTQRGTS 419
Cdd:PRK08676 355 DRFDRIFDVFRLQPVAAWGVILGSAAIIGMPPFPLFLSKFFILLQLGGISVWLVLAVLLLLLLAASSFAIFLLKAFTRVS 434
|
.
gi 2772189694 420 P 420
Cdd:PRK08676 435 E 435
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
104-371 |
2.43e-09 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 59.19 E-value: 2.43e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 104 PLLLL-------AFSATELMLFYITFEATLIPTLILITrWGSQPERLSAGIYLLFYTLISSLPLLVTILYLHTHIGTLHL 176
Cdd:PRK12663 112 PFILLlmagvigSFLTGDLFNLYVWFEVMLIASFVLIT-LGQEREQLRGAIKYVVLNLIGSWLFLLGIGLLYGTFGTLNM 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 177 TMLKLSHPTLTNSWTDLLLSLALLMAFMVKAPLYGLHlWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRLTLLIGPLPPH 256
Cdd:PRK12663 191 AHIAMRLNDMGDTATLTTIALLFLLAFGMKAALFPFM-WLPAAYHTPNTEVAALFAALLTKVGIYALIRVFTLLFPQERE 269
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 257 LHYPFLTLALWGALMTSSI-CLRQTDLKSLIAYSSVSHMGLVIAASILQTHWSFSGAMILMISHGLTSSMLFCLANTTYE 335
Cdd:PRK12663 270 LLHPLLATMAAITMVIGALgALAYKDIRRIAGYQVISSIGFILLGLALGTPAGINGAIFYLVHDMVVKTALFLIAGSLVR 349
|
250 260 270
....*....|....*....|....*....|....*.
gi 2772189694 336 RTHSRILLLTRGLQPLLPLMATWWLLANLTNMALPP 371
Cdd:PRK12663 350 LTGYRSLQYLGGLYRKEPLFGALFLILIFAIGGLPP 385
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
89-398 |
2.48e-09 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 59.36 E-value: 2.48e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 89 PIRKRIFITTLITVQPLLLLAFS-------ATELMLFYITFEATLIPTLILITRWGSQPERLSAGIYLLFYTlISSLPLL 161
Cdd:PRK12662 99 PNRKEISVNKIPSFYSAFLLCLGgllgilvSNDVFNIYVFLEISSISSYVLVAMGRDKKALVAAFEYLIIGT-IGATFYL 177
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 162 VTILYLHTHIGTLHLTMLKLSHPTLTNSWTDLLLSLALLMAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGY 241
Cdd:PRK12662 178 IGIGFLYAITGTLNMGDMFLIIQDLPTNRAIQIGVLFIMVGLFIKAALFPFHKWLIQAYSEAPSFISVFFSGTSTKVMIY 257
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 242 GIMRL-------TLLIGPLPphLHYPFLTLALWGALMTSSICLRQTDLKSLIAYSSVSHMGLVIAASILQTHWSFSGAMI 314
Cdd:PRK12662 258 LIIRIvydvfkaNFVFTTLP--FNNVFMILAALAIVFGSVLAILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVA 335
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 315 LMISHGLTSSMLFCLANTTYERTHSRILLLTRGLQPLLPLMATWWLLANLTNMALPPTTNLMAELTIMIALFN---WSVL 391
Cdd:PRK12662 336 YIVNHSIVKSALFMVSGSISYHFGTTKLEDCLNLWKSMPKITLAFVLLSLSLIGMPPTSGFVAKWYILDAFIKsnaWIGL 415
|
....*..
gi 2772189694 392 TIFLTGT 398
Cdd:PRK12662 416 VVLLVGS 422
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
110-337 |
6.25e-09 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 58.08 E-value: 6.25e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 110 FSATELMLFYITFEATLIPTLILITRwGSQPERLSAGIYLLFyTLISSLPLLVTILYLHTHIGTLHLTMLKLSHPTLTNS 189
Cdd:PRK08668 115 FLANDLLTLYIFWEIMTFSSFMMVPM-GKKESRKASLKYFVL-SAIGAYAMLYAIFLIYAKTGTFDFADISQGLINDTST 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 190 WTDLLLSLALLMAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYG-IMRLTLLIG-------------PLPp 255
Cdd:PRK08668 193 GFALIVFLFLLAFGVAKAGIFPLHVWAPDAYSEAPQSFSAVLSGQLSKLGAYGfLLVLYVLPGtklfsefgtyrgvPLF- 271
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 256 hlHYPFLTLALWGALMTSSICLRQTDLKSLIAYSSVSHMGLVIAASILQTHWSFSGAMILMISHGLTSSMLFCLANTTYE 335
Cdd:PRK08668 272 --NYILAWLGNISIIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSLGFAGGLFHVFNHALFKGLFFLIFAAVIY 349
|
..
gi 2772189694 336 RT 337
Cdd:PRK08668 350 RT 351
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
106-447 |
1.01e-08 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 57.13 E-value: 1.01e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 106 LLLAFSaTELMLFYITFEATLIPTLILITrWGSQPERLSAGIYLLFYTLISSLPL-LVTILYLHTHIGTLHLTMLKLShp 184
Cdd:PRK06589 130 VLIALS-SDLFTMFVCYELLTISTAFLIG-HTRNNISLSGGYKYLKILMISALLLfLPAVILIYTKTGNLDFVSGGLF-- 205
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 185 tltnSWTDLLLSLALLMAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRLTLLIGPLP-----PHLHY 259
Cdd:PRK06589 206 ----SKNQSIILLLMFIYGIAKTAIFPVHSWLPAAMVAHYPVSALLHAVIVVKTGLFCIYKILLYIFGLSylqriFAEFN 281
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 260 PFLTLALWGALMTSSICLRQTDLKSLIAYSSVSHMGLVIAASILQTHWSFSGAMILMISHGLTSSMLFCLANTTYERTHS 339
Cdd:PRK06589 282 WLIFIPIVSIFYSSLKALKTDNIKKILAYSTISQLSLALLSAFILTPKALGAAILHLVSHSFAKICLFYSMGSIYSLKKE 361
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 340 RILLLTRGLQPLLPLMATWWLLANLTNMALPPTTNLMAELTIMIALFN----WSVLTIFLTGTATLLTASYTLFMLLTTQ 415
Cdd:PRK06589 362 DQVDKLHGTSKSFPLISFIISISSLSLIGIPIFSGFISKFLILLAASEqnqpWLSIIVMLVVIASSILSALYLLKILSSI 441
|
330 340 350
....*....|....*....|....*....|..
gi 2772189694 416 RGTSPThitslQNSSTREHLLMTLHITPLLLL 447
Cdd:PRK06589 442 YKPSLS-----ENSFITKSLPYLMQISVITCC 468
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
203-387 |
3.80e-08 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 55.54 E-value: 3.80e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 203 FMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRLTLLIGPLP--PHLHYPFLTLALWGALMTSSICLRQT 280
Cdd:PRK08377 216 LAVEAELFPLNAWAPDAYQAAPHPITVMFSAFVVKAGLYAMARILYLMQNANgwSSVLKLVIIMATLTVFFAELSALRQK 295
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 281 DLKSLIAYSSVSHMGLVIAASILQTHWSFSGAMILMISHGLTSSMLFCLANTTYERTHSRILLLTRGLQPLLPLMATWWL 360
Cdd:PRK08377 296 NVKRMIAYSSIGQVGMIALALALGTQAGVDAGVFHMINHAIVKALLFLAVGYVGITLGGTEIEKFEGLGKRMPLTALALT 375
|
170 180
....*....|....*....|....*..
gi 2772189694 361 LANLTNMALPPTTNLMAELTIMIALFN 387
Cdd:PRK08377 376 IGALSTVGIPLFNVFWSKFRIILAGLS 402
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
203-386 |
3.97e-07 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 52.58 E-value: 3.97e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 203 FMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRLTL-LIGPLPPHLHYPFLTLALWGALMTSSICLRQTD 281
Cdd:PRK06521 220 FGAKAGLVPLHVWLPRAHPAAPSHVSALMSGVMLKVAIYGILRVVFdLLGAPGWWWGVLVLALGAISAVLGVLYALAEHD 299
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 282 LKSLIAYSSVSHMGLVIA----ASILQTH-------WSFSGAMILMISHGLTSSMLFCLANTTYERTHSRILLLTRGLQP 350
Cdd:PRK06521 300 LKRLLAYSTIENIGIIFVglglAMVFIAYgmpllaaLALTAALYHLLNHALFKSLLFLGAGAVLHATGTRDMEKLGGLIR 379
|
170 180 190
....*....|....*....|....*....|....*.
gi 2772189694 351 LLPLMATWWLLANLTNMALPPTTNLMAELTIMIALF 386
Cdd:PRK06521 380 RMPWTAWAFLIGCLAISALPPLNGFVSEWLLLQSLL 415
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
59-380 |
1.75e-06 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 50.34 E-value: 1.75e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 59 DQISSPLLVLSCWLLPLMLLASQNHLQHEPPIRKRIFITTLITVqpLLLLAFSATELMLFYITFEATLIPTLILITRWGS 138
Cdd:MTH00032 79 DTLSVTMLLVISSISTLVHIYSTSYMSDDPHVPRFLCYLSLFTF--LMMVLVTSDNYLQLFIGWEGVGVCSYLLVAFWTT 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 139 QPERLSAGIYLLFYTLISSLPLLVTILYLHTHIGTLHLTMLK---LSHPTLTNSWTDLLLSLALLMAFMV---------- 205
Cdd:MTH00032 157 RIQANKAAIKAIVVNRVGDVGVILGMVLIYKTIGSLDFLTFNggsVGSGIMDRGYYGGGAYESPLAPFAIigillligci 236
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 206 -KAPLYGLHLWLPKAhVEAPIAGSMLLAALLLKLGGYGIMRLTLligPLPPHLHYPFLTLALWGAL---MTSSICLRQTD 281
Cdd:MTH00032 237 gKSAQLGLHTWLPDA-MEGPTPVSALIHAATMVTAGVFLMIRSF---PLFEKAPLTLLIITIFGALtafFAATVGLVQND 312
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 282 LKSLIAYSSVSHMGLVIAasILQTHWSFSGAMILMISHGLTSSMLFCLA-----NTTYERTHSRILlltRGLQPLLPLMA 356
Cdd:MTH00032 313 LKKVIAYSTCSQLGYMVL--IIGIEGSHNVGLFHLVNHAFFKALLFLSAgsvihSTTVDEQDMRKM---GGLIHSIPFTY 387
|
330 340
....*....|....*....|....*....
gi 2772189694 357 TWWLLANLTNMALPPTT-----NLMAELT 380
Cdd:MTH00032 388 TMMLIGSFSIMGLPYLTgfyskDLILELT 416
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
212-396 |
5.45e-06 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 48.67 E-value: 5.45e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 212 LHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRLTLLIGPLPPHLHYPFLTLALWGALMTSSICLRQTDLKSLIAYSSV 291
Cdd:PRK08042 199 LHGWVPQAHANASAPAAALFSTVVMKIGLLGILTLSLLGGNAPLWWGVALLVLGMITAFVGGLYALMEHNIQRLLAYHTL 278
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 292 SHMGL--------VIAASILQTHW---SFSGAMILMISHGLTSSMLFCLANTTYERTHSRILLLTRGLQPLLPLMATWWL 360
Cdd:PRK08042 279 ENIGIillglgagVTGIALEQPALialGLVGGLYHLLNHSLFKSVLFLGAGSVWFRTGHRDIEKLGGIGKKMPVISIAML 358
|
170 180 190
....*....|....*....|....*....|....*.
gi 2772189694 361 LANLTNMALPPTTNLMAELTIMIALFNWSVLTIFLT 396
Cdd:PRK08042 359 VGLMAMAALPPLNGFAGEWVIYQSFFKLSNSGAFVA 394
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
94-387 |
2.54e-05 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 46.48 E-value: 2.54e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 94 IFITTLITVQPLLLLAfSATELMLFYITFEATLIPTLILITRWGSQPERLSAGI-YLLFYTLISSLpLLVTILYLHTHIG 172
Cdd:TIGR01770 104 FYILLLFALLGIFLLV-SSNDLLSIYLGLELQSLCFYVLAGLKRKSRFSTEAGLkYFILGAFSSGL-LLFGISLIYGFTG 181
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 173 TLHLTMLKLSHPTLTNSWTDLLL-SLALLMAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRLTLLI- 250
Cdd:TIGR01770 182 SLNFEDLLLFLSNGMLNISLLLLgIVLILVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKIAIFAVFLRLFLYIl 261
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 251 GPLPPHLHYPFLTLALWGALMTSSICLRQTDLKSLIAYSSVSHMGLVIAASILQTHWSFSGAMILMISHGLTS----SML 326
Cdd:TIGR01770 262 FGFSEAWQIFLAIIAFLSMLIGNFGALAQKKVKRLLAYSSISHVGYILIGLLAGTLEGIKAVLFYIFIYALMSlgafGVL 341
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2772189694 327 FCLANTTYERTHSriLLLTRGLQPLLPLMATWWLLANLTNMALPPTTNLMAELTIMIALFN 387
Cdd:TIGR01770 342 SLLRSYKDEWIEY--ISDFAGLFKTNPILAILILIFMFSLAGIPPLAGFFGKFYVFFALLK 400
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
255-371 |
2.81e-05 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 46.18 E-value: 2.81e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 255 PHLHYPFLTLALWGALMTSSICLRQTDLKSLIAYSSVSHMGLVIAASILQTHWSFSGAMILMISHGLTSSMLFCLANTTY 334
Cdd:PRK06277 263 PSAQGVLIALSVLAMVFGVVMALLQTDYKRLLAYHAISQGGYVAAGLALGTPLGIVAGIFHAINHVIYKSALFLGAGIVS 342
|
90 100 110
....*....|....*....|....*....|....*..
gi 2772189694 335 ERTHSRILLLTRGLQPLLPLMATWWLLANLTNMALPP 371
Cdd:PRK06277 343 YRTKTSNLRKLGGLLPVMPVVAFMVLCAKLAISGVPP 379
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
243-323 |
6.39e-05 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 45.11 E-value: 6.39e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 243 IMRLTLLI-GPLPPHLHYPFLTLA----LWGALMTssicLRQTDLKSLIAYSSVSHMGLVIAASILQTHWSFSGAMILMI 317
Cdd:COG1007 253 LLRLLVEAfPGLAADWQLLLAVLAvlsmTVGNLAA----LAQTNVKRMLAYSSIAHAGYLLLGLAAGTPLGVSAALFYLL 328
|
....*.
gi 2772189694 318 SHGLTS 323
Cdd:COG1007 329 AYLFMN 334
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
105-447 |
1.11e-04 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 44.68 E-value: 1.11e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 105 LLLLAFSATELMLFyITFEATLIPTLILITRWGSQPERLSAGIYLLFYTLISSLPLLVTILYLHTHIGTLHLTMLkLSHP 184
Cdd:MTH00020 124 MVVLVTSDNYLQLF-IGWEGVGLCSYLLINFWLTRIEANKAAIKAMLVNRVGDIGLLLAMFLLWDRFGSLDFSSV-FNMV 201
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 185 TLTNSWTDLLLSLALLMAFMVKAPLYGLHLWLPKAhVEAPIAGSMLLAALLLKLGGygimrLTLLIGPLPPHLHYPFLTL 264
Cdd:MTH00020 202 VSAPSSDITLICLFLFIGAVGKSAQLGLHTWLPDA-MEGPTPVSALIHAATMVTAG-----VFLLIRSSPLFEQAPLALI 275
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 265 AL-----WGALMTSSICLRQTDLKSLIAYSSVSHMGLVIAASILqTHWSFSgaMILMISHGLTSSMLFCLANTT-YERTH 338
Cdd:MTH00020 276 IVtivgsLTVFFAATVGLVQNDLKKVIAYSTCSQLGYMVVACGL-SHYSIS--LFHLMNHAFFKALLFLSAGSViHALSD 352
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 339 SRILLLTRGLQPLLPLMATWWLLANLTNMALPPTTNLMA-ELTIMIALFNWSVLTIF-LTGTATLLTASYTLFMLlttqr 416
Cdd:MTH00020 353 EQDMRKMGGLISFLPLTYIFFLIGSLSLMGFPYLTGFYSkDLILELAFGQYYLIFAYwLGCFSALLTAFYSIRLI----- 427
|
330 340 350
....*....|....*....|....*....|....*..
gi 2772189694 417 gtsptHITSLQNSSTREHLLMTLH------ITPLLLL 447
Cdd:MTH00020 428 -----YLTFLSNTNLKKAVFFHLHegdwnlLLPLGIL 459
|
|
| PRK12666 |
PRK12666 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
202-330 |
1.43e-04 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237166 [Multi-domain] Cd Length: 528 Bit Score: 44.07 E-value: 1.43e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 202 AFMVKAPLYGLHLWLPKAHVEA--PIAGSMllaALLLKLGGYGIMRLTLLI-GPLPPHLHYPFLTLALWGALMTSSI--- 275
Cdd:PRK12666 219 VFLIKAAMWPLNFWLPPAYAAAsaPVAALF---AIMTKVGIYAILRLSTLLfGPEAGASAGFGQDWLLPGGLATLAFgai 295
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*.
gi 2772189694 276 -CLRQTDLKSLIAYSSVSHMGLVIAASILQTHWSFSGAMILMISHGLTSSMLFCLA 330
Cdd:PRK12666 296 gVLAAQRLRRLAAYLVLVSSGTLLAAIGLGNPAATAAALYYLVHSTLAAAALFLLA 351
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
277-323 |
1.52e-04 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 44.04 E-value: 1.52e-04
10 20 30 40
....*....|....*....|....*....|....*....|....*..
gi 2772189694 277 LRQTDLKSLIAYSSVSHMGLVIAASILQTHWSFSGAMILMISHGLTS 323
Cdd:PRK05777 289 LSQTNIKRLLAYSSIAHAGYLLVGLAAGTAEGYSAVLFYLLAYLFMT 335
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
107-408 |
2.07e-03 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 40.68 E-value: 2.07e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 107 LLAFS--------ATELMLFYITFEATLIPTLILItrwGSQPERLS---AGIYLLFYTLISSLPLLVTILYLHTHIGTLH 175
Cdd:PRK12644 112 LVAFAgamfglvtSDNLLLLYVFWELTTVLSFLLI---GHYAERAAsrrAALQALLVTTAGGLAMLVGIIILGQAAGTYR 188
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 176 LTMLklshptLTNSWTDLLLSLALLMAF---MVKAPLYGLHLWLPKAhVEAPI-------AGSMLLAalllklGGYGIMR 245
Cdd:PRK12644 189 LSEL------LADPPTGPAVSVAVVLILvgaLSKSAIVPFHFWLPGA-MAAPTpvsaylhAAAMVKA------GIYLVAR 255
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 246 LTLLIGPLPPhLHYPFLTLALWGALMTSSICLRQTDLKSLIAYSSVSHMGLVIAASILQTHWSFSGAMILMISHGLTSSM 325
Cdd:PRK12644 256 LAPGFADVPV-WRPTVLVLGLATMLLGGWRALRQHDLKLILAYGTVSQLGFLTVLVGIGTRDAALAGLAMLLAHALFKAA 334
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772189694 326 LFCLANTTYERTHSRILLLTRGLQPLLPLMATWWLLANLTNMALPPTTNLMAELTIMIALFNWSVL----TIFLTGTA-- 399
Cdd:PRK12644 335 LFLVVGIIDHSTGTRDIRKLSGLGRRQPVLAVVAALAAASMAGLPPLLGFVAKEAALEAVLHDGALgpagPVVLAGIVlg 414
|
....*....
gi 2772189694 400 TLLTASYTL 408
Cdd:PRK12644 415 SILTVAYSL 423
|
|
| |
