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Accession: PRJNA930781 ID: 930781

Symphalangus syndactylus Umbrella project

See Genome Information for Symphalangus syndactylus
This is the Symphalangus syndactylus sample Jambi (ToLID: mSymSyn1). This includes autosomes from one pseudohaplotype, chrX, chrY, MT, and unplaced sequences not assigned to a pseudohaplotype. This assembly was generated with Verkko using PacBio Hifi and ONT UL data. Graph phasing to inform path selection was done using Hi-C information.
AccessionPRJNA930781
TypeUmbrella project
OrganismSymphalangus syndactylus[Taxonomy ID: 9590]
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hylobatidae; Symphalangus; Symphalangus syndactylus
SubmissionRegistration date: 2-Feb-2023
National Human Genome Research Institute, National Institutes of Health
RelevanceEvolution
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)105466
WGS master2
Transcript105361
SRA Experiments28
Protein Sequences89195
Publications
PubMed2
PMC1
Other datasets
BioSample1
Assembly2
SRA Data Details
ParameterValue
Data volume, Gbases1,759
Data volume, Tbytes0.82
This project encompasses the following 4 sub-projects:
Project TypeNumber of Projects
Genome sequencing
Highest level of assembly :
Chromosomes
SRA or Trace
Total

3
1
4
BioProject
accession
Assembly
level
OrganismTitle
PRJNA916729 ChromosomesSymphalangus syndactylusSymphalangus syndactylus Genome sequencing and assembly (National Human Genome Research...)
PRJNA916728 ChromosomesSymphalangus syndactylusSymphalangus syndactylus Genome sequencing and assembly (National Human Genome Research...)
PRJNA946760 ChromosomesSymphalangus syndactylusSymphalangus syndactylus RefSeq Genome sequencing (NCBI)
PRJNA976702 SRA or TraceSymphalangus syndactylusSymphalangus syndactylus isolate:Jambi Raw sequence reads (National Human Genome Research...)

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