Conserved Protein Domain Family
NTS

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pfam15447: NTS 
N-terminal segments of PfEMP1
This family, the N-terminal segment, is the most variable part of the variant surface antigen family of Plasmodium falciparum, the erythrocyte membrane protein-1 (PfEMP1) proteins. PfEMP1 is an important target for protective immunity and is implicated in the pathology of malaria through its ability to adhere to host endothelial receptors. A structural and functional study of the N-terminal domain of PfEMP1 from the VarO variant comprising the N-terminal segment (NTS) and the first DBL domain (DBL1alpha1), shows this region is directly implicated in rosetting. NTS, previously thought to be a structurally independent component of PfEMP1, forms an integral part of the DBL1alpha domain that is found to be the important heparin-binding site. This family is closely associated with PFEMP, pfam03011, and Duffy_binding, pfam05424.
Statistics
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PSSM-Id: 406013
Aligned: 56 rows
Threshold Bit Score: 45.8525
Created: 22-Aug-2024
Updated: 4-Dec-2024
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q8I220      21 SAKHLLDSIGKKVHDQVKNGadgtgasgdAKNYIDDLKGDLQKAP 65   Plasmodium falciparum 3D7
Q8IBX0      10 gARDVLEQFGEIVQKKVHNE---------VDAYREELKGKLWEAK 45   Plasmodium falciparum 3D7
Q8IEU9      23 SARGVLEEIGKKIKDKTEKE----------SKHVRQLKGKLSNAK 57   Plasmodium falciparum 3D7
XP_965999   22 SARNVLEKIGRHIKDEINKN----------SNHTNKLKGTLSNAQ 56  
Q8IAK2      21 SARNVFENIAEIIYNRVKED---------AEKRGKSLKGDYKRAK 56   Plasmodium falciparum 3D7
Q8IHM0      20 SARNVLENVARLIKAKATKD---------VKRHRNVLKGNLRNAK 55   Plasmodium falciparum 3D7
Q8IIZ4      20 SARNVLEGFAKDIKRDVSNN---------AKRHGKVLKGNLRDAK 55   Plasmodium falciparum 3D7
Q8I2E4      14 slRDVLENIGSGIKDKRKNQ----------SKYTDKLKGILTKAK 48   Plasmodium falciparum 3D7
Q9NFB4      14 SARNVLENIANEIKVKRENE----------RKYNDKLKGSLWEAR 48   Plasmodium falciparum 3D7
Q8I218      21 SARNVLENIGIEIYNEEKKK---------VNGYTSQLRGDLSRAR 56   Plasmodium falciparum 3D7
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