1J2P,1YA7


Conserved Protein Domain Family
proteasome_alpha_archeal

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cd03756: proteasome_alpha_archeal 
Click on image for an interactive view with Cn3D
proteasome_alpha_archeal. The 20S proteasome, multisubunit proteolytic complex, is the central enzyme of nonlysosomal protein degradation in both the cytosol and nucleus. It is composed of 28 subunits arranged as four homoheptameric rings that stack on top of one another forming an elongated alpha-beta-beta-alpha cylinder with a central cavity. The proteasome alpha and beta subunits are members of the N-terminal nucleophile (Ntn)-hydrolase superfamily. Their N-terminal threonine residues are exposed as a nucleophile in peptide bond hydrolysis. Mammals have 7 alpha and 7 beta proteasome subunits while archaea have one of each.
Statistics
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PSSM-Id: 239725
Aligned: 14 rows
Threshold Bit Score: 312.343
Created: 12-Jun-2006
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
active site
Conserved site includes 5 residues -Click on image for an interactive view with Cn3D
Feature 1:active site [active site]
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                 #               # #            #                    
1J2P_G      7 GYDRAITVFSPDGRLFQVEYAREAVKRGATAIGIKCKEGVILIADKRVGSKLLEKDTIEKIYKIDEHICAATSGLVADAR 86  Archaeoglobus fulg...
1YA7_G      7 AYDRAITVFSPDGRLFQVEYAREAVKKGSTALGMKFANGVLLISDKKVRSRLIEQNSIEKIQLIDDYVAAVTSGLVADAR 86  Thermoplasma acido...
O59219      9 GYDRAITVFSPDGRLFQVNYAREAVKRGATAVGVKCNEGVVLAVEKRITSRLIEPESYEKIFQIDDHIAAASSGIIADAR 88  Pyrococcus horikoshii
Q9YC01     11 AYDRAATIFSPEGDLYQVRYAFEAVKKGWTSLGIKTNEGVVIAAEKRFIGPLVDIDDIDKIYKIDDHIGVAFAGMGGDGR 90  Aeropyrum pernix
Q9UXC6      9 GYDRAITIFSPDGSLYQVDYAFEAVKKGWTAIGIKSKSSVVIASEKRKAQSLLDVDSIEKVFLIDDHVGCSFAGLASDGR 88  Sulfolobus solfata...
Q9V2V5      8 AYDRGTSLFSPDGRIYQVEYAREAVKRGAPVLGVRTADGVVLAALRSTPSELMEAESIEKLHKLDDALGAATAGHVADAR 87  Haloferax volcanii
P57697      9 AYDRGITIFSPDGRLYQVEYAREAVKRGTASIGVRTPEGVVLVVDKQTRSPLLEGSSVEKLHKIDDHVGAASAGHVADAR 88  Halobacterium sp. ...
Q8ZVM1      8 GYDRAITIFSPEGKIYQVEYAGEAVKRGWPTVGVKCKAGVVLTAEKRKISALFDSSSLEKIYLIDEHVAASPSGLLADAR 87  Pyrobaculum aeroph...
Q8TPX5      6 GYDRAITVFSPDGRLFQVEYAREAVKRGTTAVGIKAADGVVLLVDKRITSRLVEAESIEKIFQIDEHIGAATSGLVADAR 85  Methanosarcina ace...
Q8TYB7      9 AYDRAITVFSPDGRLFQVEYAREAVKRGTTALGIKVEEGVVLGVDKRVTSKLIEPESIEKVYQIDTHIGAATAGLVADAR 88  Methanopyrus kandleri
Feature 1                                                                                     
1J2P_G     87 VLIDRARIEAQINRLTYDIPITVKELAKKICDFKQQYTQYGGVRPFGVSLLIAGVNe--vPKLYETDPSGALLEYKATAI 164 Archaeoglobus fulg...
1YA7_G     87 VLVDFARISAQQEKVTYGSLVNIENLVKRVADQMQQYTQYGGVRPYGVSLIFAGIDqi-gPRLFDCDPAGTINEYKATAI 165 Thermoplasma acido...
O59219     89 VLVNRARLEAQIHRLTYGEPAPLAVIVKKICDLKQMHTQYGGVRPFGAALLMAGVNe--kPELYETDPSGAYFAWKAVAI 166 Pyrococcus horikoshii
Q9YC01     91 ILIDYARVFTVRHRLLYGEPPPVELVAKVVADVKQAYTQHGGVRPFGVALIFAGVNpdgtTKVYRTDPGGQYFSFKAIAI 170 Aeropyrum pernix
Q9UXC6     89 VLIDYARNIALQHRLIYDEPVSIDYLTKSVADVKQMYTQHGGVRPFGVALVIAGIDks-vPKLFMTEPSGQYMPYQAVAI 167 Sulfolobus solfata...
Q9V2V5     88 KLVDFARTTAQREHLRYGEPIGVETLTKTITDNIQESTQSGGTRPYGASLLIGGVEng-sGRLFATDPSGTPQEWKAVAI 166 Haloferax volcanii
P57697     89 QLVDFARQQSQVERVRYDEPIGVRTLTKSVTDHIQQYTQVGGARPFGVALLIAGVEgg-ePRLFETDPSGTSNEWKAVAI 167 Halobacterium sp. ...
Q8ZVM1     88 ILIDYARDVALSHRFIYDEPIDVEFLTKAVCNLKQQYTQFGGARPFGVALLIAGVDrh-gARLYQTDPSGVYIGYFATAI 166 Pyrobaculum aeroph...
Q8TPX5     86 SLVDRARVEAQVNRVSYDEPIGVEVISKKICDHKQTYTQYGGVRPYGTALLIAGVDdn-kPRLFETDPSGALLEYKATAI 164 Methanosarcina ace...
Q8TYB7     89 VLVERARIEAQTYRYTYGEPIDVDVLVKAICDLKQVYTQHGGVRPFGTALLIAGVDtk-gCRLFETDPSGALTEHKATAI 167 Methanopyrus kandleri
Feature 1      #                                                           
1J2P_G    165 GMGRMAVTEFFEKEYRDDlsfddAMVLGLVAMGLSIesel---------vpeNIEVGYVKV 216 Archaeoglobus fulgidus
1YA7_G    166 GSGKDAVVSFLEREYKENlpekeAVTLGIKALKSSLeege---------elkAPEIASITV 217 Thermoplasma acidophilum
O59219    167 GSGRNTAMAIFEEKYKDDmsleeAIKLAIFALAKTMekp----------saeNIEVAIITV 217 Pyrococcus horikoshii
Q9YC01    171 GSGEQVANEMFEKHYRSDmsleeATKLALKILYAIIrktvedkekaiatlpdQVELAYITV 231 Aeropyrum pernix
Q9UXC6    168 GQGYYTATEFLEKNYKEDlnveeTILLALKALSATLkpnek-------ltpnTVEIGYAST 221 Sulfolobus solfataricus
Q9V2V5    167 GGHREDVQAALEDGYAEDlsledGLALAVEALVAADee------------ieSDELNLVTV 215 Haloferax volcanii
P57697    168 GSNRGDIQEFLEDEYDAGlsvddGIDLALRALNEGRedal---------sgdGVGVGIVDA 219 Halobacterium sp. NRC-1
Q8ZVM1    167 GAESGTITEFLEKNYKFDmemgeCIELALKALASAVeit----------dsaNVEVAYATI 217 Pyrobaculum aerophilum
Q8TPX5    165 GAGRNAVVEVFEADYREDmnmdaAILLGMDALYKAAegkf---------dagTLEVGVVSL 216 Methanosarcina acetivorans
Q8TYB7    168 GEGRQEALDVFEEEYREDmtlqeAIELAVRALYEASreet---------tadNLEIAVVDK 219 Methanopyrus kandleri

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