GEO DataSets

(Submitter supplied) Nitrite-oxidizing bacteria are vital players in the global nitrogen cycle that convert nitrite to nitrate during the 2nd step of nitrification. Within this functional guild, the genus Nitrospira is among the most widespread and phylogenetically and physiologically diverse nitrite oxidizers and its members drive nitrite oxidation in many natural and biotechnological ecosystems. Despite their ecological and biotechnological importance, our understanding of Nitrospira’s energy metabolism is still limited. more...

Organism:

Nitrospira moscoviensis

Type:

Expression profiling by high throughput sequencing

Platform:

GPL25899

9 Samples

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(Submitter supplied) Full title: Environmental transcriptome analysis of LfeRT32a in its natural microbial community comparing the biofilm and planktonic modes of life. Extreme acidic environments are characterized among other features by the high metal content and the lack of nutrients (oligotrophy). Macroscopic biofilms and filaments usually grow on the water-air interface or under the stream attached to solid substrates (streamers). more...

Organism:

Leptospirillum ferrooxidans

Type:

Expression profiling by array

Platform:

GPL10022

2 Samples

Download data: GPR

(Submitter supplied) 1. A random genomic library from Leptospirillum ferrooxidans RT32a was created as described in Parro V. and Moreno-Paz M. (PNAS, 100(13):7883-7888). 2. Clone fragments were amplified by PCR and purified with a PCR Microarray Purification Kit for 96-Well and 50 µl PCR samples (Arrayit Corporation). 3. Purified PCR products were dried in a Universal Vacuum System Plus UVS400A (Savant) and resuspended in 15ul of water. more...

Organism:

Leptospirillum ferrooxidans

1 Series

2 Samples

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