U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC105372508 uncharacterized LOC105372508 [ Homo sapiens (human) ]

Gene ID: 105372508, updated on 10-Dec-2024

Summary

Go to the top of the page Help
Gene symbol
LOC105372508
Gene description
uncharacterized LOC105372508
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC105372508 in Genome Data Viewer
Location:
20p13
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 20 NC_000020.11 (3417031..3430856, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 20 NC_060944.1 (3447951..3461779, complement)

Chromosome 20 - NC_000020.11Genomic Context describing neighboring genes Neighboring gene dynein axonemal assembly factor 9 Neighboring gene UBE2V1 pseudogene 1 Neighboring gene small nucleolar RNA U3 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 12618 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 12619 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 12620 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 17478 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr20:3389216-3389717 Neighboring gene uncharacterized LOC105372509 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 17479 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 17480 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 12621 Neighboring gene TCEAL9 pseudogene 1 Neighboring gene attractin Neighboring gene splicing factor 3a, subunit 3 pseudogene 1

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Expression

Go to the top of the page Help
  • Project title: Tissue-specific circular RNA induction during human fetal development
  • Description: 35 human fetal samples from 6 tissues (3 - 7 replicates per tissue) collected between 10 and 20 weeks gestational time were sequenced using Illumina TruSeq Stranded Total RNA
  • BioProject: PRJNA270632
  • Publication: PMID 26076956
  • Analysis date: Mon Apr 2 22:54:59 2018

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

Phenotypes

Go to the top of the page Help

Review eQTL and phenotype association data in this region using PheGenI

Variation

Go to the top of the page Help

See studies and variants in dbVar

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000020.11 Reference GRCh38.p14 Primary Assembly

    Range
    3417031..3430856 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_937212.3 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060944.1 Alternate T2T-CHM13v2.0

    Range
    3447951..3461779 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007089371.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials