U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Rab27 RAS oncogene family member Rab27 [ Ixodes scapularis (black-legged tick) ]

Gene ID: 8033539, updated on 31-Jul-2024

Summary

Go to the top of the page Help
Gene symbol
Rab27
Gene description
RAS oncogene family member Rab27
See related
VectorBase:ISCP_023343; EnsemblRapid:LOC8033539
Gene type
protein coding
RefSeq status
MODEL
Organism
Ixodes scapularis
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Chelicerata; Arachnida; Acari; Parasitiformes; Ixodida; Ixodoidea; Ixodidae; Ixodinae; Ixodes
Orthologs
fruit fly all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See Rab27 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
103 current ASM1692078v2 (GCF_016920785.2) Unplaced Scaffold NW_024609835.1 (127423298..127620343, complement)
102 previous assembly Ixodes_scapularus_ComboLowHiFi (GCF_016920785.1) Unplaced Scaffold NW_024388004.1 (111674..237198, complement)

NW_024609835.1Genomic Context describing neighboring genes Neighboring gene major facilitator superfamily domain-containing protein 6 Neighboring gene uncharacterized LOC121833224 Neighboring gene uncharacterized LOC121837368 Neighboring gene uncharacterized LOC120850551 Neighboring gene Glycerol-3-phosphate dehydrogenase 1 Neighboring gene Apoptosis inducing factor

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. The role of Rab27 in tick extracellular vesicle biogenesis and pathogen infection. Butler LR, et al. Parasit Vectors, 2024 Feb 9. PMID 38336752, Free PMC Article
  2. Transcriptome of the female synganglion of the black-legged tick Ixodes scapularis (Acari: Ixodidae) with comparison between Illumina and 454 systems. Egekwu N, et al. PLoS One, 2014. PMID 25075967, Free PMC Article
  3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. The role of Rab27 in tick extracellular vesicle biogenesis and pathogen infection.
    Title: The role of Rab27 in tick extracellular vesicle biogenesis and pathogen infection.
Submit: New GeneRIF Correction

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in melanosome transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of exocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in melanosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in secretory granule IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
ras-related protein Rab-27A

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Ixodes scapularis Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1692078v2

Genomic

  1. NW_024609835.1 Reference ASM1692078v2

    Range
    127423298..127620343 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_042289797.1 → XP_042145731.1  ras-related protein Rab-27A

    Related
    XP_042145731.1, XM_042289797.1
    Conserved Domains (1) summary
    cl38936
    Location:18 → 194
    P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases

  2. XM_040211328.2 → XP_040067262.1  ras-related protein Rab-27A

    Related
    XP_040067262.1, XM_040211328.2
    Conserved Domains (1) summary
    cl38936
    Location:18 → 194
    P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials