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    trmt2a tRNA methyltransferase 2 homolog A [ Scleropages formosus (Asian bonytongue) ]

    Gene ID: 108940382, updated on 14-Mar-2024

    Summary

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    Gene symbol
    trmt2a
    Gene description
    tRNA methyltransferase 2 homolog A
    See related
    Ensembl:ENSSFOG00015017419
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Scleropages formosus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Osteoglossocephala; Osteoglossomorpha; Osteoglossiformes; Osteoglossidae; Scleropages
    Orthologs
    human zebrafish all
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    Genomic context

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    See trmt2a in Genome Data Viewer
    Location:
    chromosome: 12
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    101 current fSclFor1.1 (GCF_900964775.1) 12 NC_041817.1 (6416776..6431671)
    100 previous assembly ASM162426v1 (GCF_001624265.1) Unplaced Scaffold NW_017372141.1 (802201..816675)

    Chromosome 12 - NC_041817.1Genomic Context describing neighboring genes Neighboring gene zinc finger DHHC-type palmitoyltransferase 8b Neighboring gene small nucleolar RNA SNORA77 Neighboring gene RAN binding protein 1 Neighboring gene DGCR8 microprocessor complex subunit Neighboring gene transport and golgi organization 2 homolog (Drosophila)

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA methyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in RNA processing IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    tRNA (uracil-5-)-methyltransferase homolog A

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Scleropages formosus Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference fSclFor1.1 Primary Assembly

    Genomic

    1. NC_041817.1 Reference fSclFor1.1 Primary Assembly

      Range
      6416776..6431671
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_018762522.2 → XP_018618038.1  tRNA (uracil-5-)-methyltransferase homolog A isoform X1

      UniProtKB/TrEMBL
      A0A8C9RVI5, A0A8C9S9M9

    2. XM_018762525.1 → XP_018618041.1  tRNA (uracil-5-)-methyltransferase homolog A isoform X2

      UniProtKB/TrEMBL
      A0A8C9S9M9

    3. XM_018762523.2 → XP_018618039.1  tRNA (uracil-5-)-methyltransferase homolog A isoform X1

      UniProtKB/TrEMBL
      A0A8C9RVI5, A0A8C9S9M9
      Related
      ENSSFOP00015027145.1, ENSSFOT00015027454.2

    4. XM_018762524.2 → XP_018618040.1  tRNA (uracil-5-)-methyltransferase homolog A isoform X1

      UniProtKB/TrEMBL
      A0A8C9RVI5, A0A8C9S9M9
      Related
      ENSSFOP00015027164.1, ENSSFOT00015027473.2
    Nucleotide Protein
    Heading Accession and Version

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