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    LOC112622170 tripartite motif-containing protein 26 [ Theropithecus gelada (gelada) ]

    Gene ID: 112622170, updated on 9-Nov-2023

    Summary

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    Gene symbol
    LOC112622170
    Gene description
    tripartite motif-containing protein 26
    See related
    Ensembl:ENSTGEG00000011216
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Theropithecus gelada
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Theropithecus
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    Genomic context

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    See LOC112622170 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    100 current Tgel_1.0 (GCF_003255815.1) 4 NC_037671.1 (1906429..1935971, complement)

    Chromosome 4 - NC_037671.1Genomic Context describing neighboring genes Neighboring gene tripartite motif-containing protein 10 Neighboring gene tripartite motif-containing protein 15 Neighboring gene polyadenylate-binding protein-interacting protein 1 pseudogene Neighboring gene oligosaccharyltransferase complex subunit OSTC pseudogene Neighboring gene nucleoside diphosphate kinase A-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037671.1 Chromosome 4 Reference Tgel_1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in positive regulation of DNA-binding transcription factor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    tripartite motif-containing protein 26

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Theropithecus gelada Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Tgel_1.0 Primary Assembly

    Genomic

    1. NC_037671.1 Reference Tgel_1.0 Primary Assembly

      Range
      1906429..1935971 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_025381426.1 → XP_025237211.1  tripartite motif-containing protein 26

      UniProtKB/TrEMBL
      A0A8D2F1Q1
      Related
      ENSTGEP00000013823.1, ENSTGET00000016582.1
      Conserved Domains (4) summary
      smart00336
      Location:97 → 138
      BBOX; B-Box-type zinc finger
      cd15826
      Location:314 → 538
      SPRY_PRY_TRIM15; PRY/SPRY domain in tripartite motif-binding protein 15 (TRIM15)
      cd16598
      Location:13 → 57
      RING-HC_TRIM26_C-IV; RING finger, HC subclass, found in tripartite motif-containing protein 26 (TRIM26) and similar proteins
      cl25732
      Location:145 → 304
      SMC_N; RecF/RecN/SMC N terminal domain

    2. XM_025381428.1 → XP_025237213.1  tripartite motif-containing protein 26

      UniProtKB/TrEMBL
      A0A8D2F1Q1
      Conserved Domains (4) summary
      smart00336
      Location:97 → 138
      BBOX; B-Box-type zinc finger
      cd15826
      Location:314 → 538
      SPRY_PRY_TRIM15; PRY/SPRY domain in tripartite motif-binding protein 15 (TRIM15)
      cd16598
      Location:13 → 57
      RING-HC_TRIM26_C-IV; RING finger, HC subclass, found in tripartite motif-containing protein 26 (TRIM26) and similar proteins
      cl25732
      Location:145 → 304
      SMC_N; RecF/RecN/SMC N terminal domain

    3. XM_025381427.1 → XP_025237212.1  tripartite motif-containing protein 26

      UniProtKB/TrEMBL
      A0A8D2F1Q1
      Conserved Domains (4) summary
      smart00336
      Location:97 → 138
      BBOX; B-Box-type zinc finger
      cd15826
      Location:314 → 538
      SPRY_PRY_TRIM15; PRY/SPRY domain in tripartite motif-binding protein 15 (TRIM15)
      cd16598
      Location:13 → 57
      RING-HC_TRIM26_C-IV; RING finger, HC subclass, found in tripartite motif-containing protein 26 (TRIM26) and similar proteins
      cl25732
      Location:145 → 304
      SMC_N; RecF/RecN/SMC N terminal domain
    Nucleotide Protein
    Heading Accession and Version

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