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    NKX2-6 NK2 homeobox 6 [ Felis catus (domestic cat) ]

    Gene ID: 101084618, updated on 17-Aug-2024

    Summary

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    Official Symbol
    NKX2-6
    Official Full Name
    NK2 homeobox 6
    Primary source
    VGNC:VGNC:78532
    See related
    EnsemblRapid:ENSFCTG00005025105
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Felis catus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Felinae; Felis
    Orthologs
    human mouse all
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    Genomic context

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    See NKX2-6 in Genome Data Viewer
    Location:
    chromosome: B1
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    105 current F.catus_Fca126_mat1.0 (GCF_018350175.1) B1 NC_058371.1 (34521079..34525329)
    104 previous assembly Felis_catus_9.0 (GCF_000181335.3) B1 NC_018726.3 (34676950..34681268)

    Chromosome B1 - NC_058371.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC123385200 Neighboring gene stanniocalcin 1 Neighboring gene NK3 homeobox 1 Neighboring gene proteasome maturation protein-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cell differentiation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    homeobox protein Nkx-2.6

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Felis catus Annotation Release 105 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference F.catus_Fca126_mat1.0 Primary Assembly

    Genomic

    1. NC_058371.1 Reference F.catus_Fca126_mat1.0 Primary Assembly

      Range
      34521079..34525329
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_023252223.2 → XP_023107991.2  homeobox protein Nkx-2.6

      UniProtKB/TrEMBL
      A0A2I2U7K2
      Related
      ENSFCTP00005050593.1, ENSFCTT00005071247.1
      Conserved Domains (1) summary
      smart00389
      Location:134 → 190
      HOX; Homeodomain
    Nucleotide Protein
    Heading Accession and Version

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