txid1239[Organism] - Structure - NCBI

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Select item 2522431.

Molecular Structure Image for 8YE9

Cryo-EM structure of Cas9-sgRNA-A25 complex[IMMUNE SYSTEM/RNA]

Taxonomy:: Streptococcus pyogenes serotype M1, Streptococcus pyogenes, Streptococcus sp. F0441

Proteins:: 2
Nucleic acids:: (RNA)
modified:: 2024-09-11

MMDB ID:: 252243
PDB ID:: 8YE9

View in iCn3D PubMed Proteins

Select item 2522422.

Molecular Structure Image for 8YE6

Cryo-EM structure of Cas9-sgRNA-A32 complex[IMMUNE SYSTEM/RNA]

Taxonomy:: Streptococcus, Streptococcus pyogenes serotype M1, Streptococcus pyogenes

Proteins:: 2
Nucleic acids:: (RNA)
modified:: 2024-09-11

MMDB ID:: 252242
PDB ID:: 8YE6

View in iCn3D PubMed Proteins

Select item 2310233.

Molecular Structure Image for 7XTG

Cryo-EM structure of Listeria monocytogenes man-PTS complexed with pediocin PA-1[MEMBRANE PROTEIN]

Taxonomy:: Pediococcus acidilactici, Latilactobacillus sakei, Listeria monocytogenes

Proteins:: 12
Chemicals:: 3
modified:: 2024-11-04

MMDB ID:: 231023
PDB ID:: 7XTG

View in iCn3D Similar Structures PubMed Proteins PubChem Compound

Select item 2252404.

Molecular Structure Image for 8CXT

CamA Adenine Methyltransferase Complexed to Cognate Substrate DNA and Inhibitor N6-benzyladenosine (Compound 1)[DNA BINDING PROTEIN/DNA]

Taxonomy:: Clostridioides difficile 630, Clostridioides difficile, Clostridioides difficile 5.3

Proteins:: 1
Nucleic acids:: (DNA)
Chemicals:: 3
modified:: 2023-10-31

MMDB ID:: 225240
PDB ID:: 8CXT

View in iCn3D Similar Structures PubMed Proteins Conserved Domains PubChem Compound

Select item 1707245.

Molecular Structure Image for 6IFO

Crystal structure of AcrIIA2-SpyCas9-sgRNA ternary complex[RNA BINDING PROTEIN/RNA]

Taxonomy:: Streptococcus pyogenes serotype M1, Streptococcus pyogenes M1 GAS, Listeria monocytogenes

Proteins:: 2
Nucleic acids:: (RNA)
modified:: 2023-11-24

MMDB ID:: 170724
PDB ID:: 6IFO

View in iCn3D Similar Structures PubMed Proteins Conserved Domains

Select item 1522886.

Molecular Structure Image for 5VW1

Crystal structure of SpyCas9-sgRNA-AcrIIA4 ternary complex[HYDROLASE]

Taxonomy:: Streptococcus pyogenes serotype M1, Listeria monocytogenes, Listeria monocytogenes M7

Proteins:: 2
Nucleic acids:: (RNA)
Chemicals:: 6
modified:: 2023-10-10

MMDB ID:: 152288
PDB ID:: 5VW1

View in iCn3D Similar Structures PubMed Proteins Conserved Domains PubChem Compound

Select item 1518307.

Molecular Structure Image for 5XBL

Structure of nuclease in complex with associated protein[HYDROLASE/RNA]

Taxonomy:: Streptococcus pyogenes serotype M1, Listeria monocytogenes, Streptococcus pyogenes

Proteins:: 2
Nucleic acids:: (RNA)
modified:: 2024-03-27

MMDB ID:: 151830
PDB ID:: 5XBL

View in iCn3D Similar Structures PubMed Proteins Conserved Domains

Select item 2582418.

Molecular Structure Image for 9ARL

CryoEM structure of BoNT-NTNH-OrfX2 complex from Clostridium botulinum strain A1-ST7B, major class[TOXIN]

Taxonomy:: Clostridium botulinum A str. Hall, Clostridium botulinum A

Proteins:: 3
modified:: 2025-01-22

MMDB ID:: 258241
PDB ID:: 9ARL

View in iCn3D PubMed Proteins

Select item 2479869.

Molecular Structure Image for 8YGJ

SpCas9-MMLV RT-pegRNA-target DNA complex (elongation 28-nt)[RNA BINDING PROTEIN/DNA/RNA]

Taxonomy:: Streptococcus pyogenes, Moloney murine leukemia virus, Streptococcus pyogenes serotype M1

Proteins:: 2
Nucleic acids:: (3 DNA, 1 RNA)
modified:: 2024-09-11

MMDB ID:: 247986
PDB ID:: 8YGJ

View in iCn3D Similar Structures PubMed Proteins

Select item 24796410.

Molecular Structure Image for 8WUV

SpCas9-MMLV RT-pegRNA-target DNA complex (elongation 16-nt)[RNA BINDING PROTEIN/RNA/DNA]

Taxonomy:: Streptococcus pyogenes, Streptococcus pyogenes serotype M1, Moloney murine leukemia virus

Proteins:: 2
Nucleic acids:: (3 DNA, 1 RNA)
modified:: 2024-09-11

MMDB ID:: 247964
PDB ID:: 8WUV

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Select item 24796311.

Molecular Structure Image for 8WUU

SpCas9-pegRNA-target DNA complex (pre-initiation)[RNA BINDING PROTEIN/RNA/DNA]

Taxonomy:: Streptococcus pyogenes serotype M1, Streptococcus pyogenes

Proteins:: 1
Nucleic acids:: (3 DNA, 1 RNA)
modified:: 2024-09-11

MMDB ID:: 247963
PDB ID:: 8WUU

View in iCn3D Similar Structures PubMed Proteins

Select item 24796212.

Molecular Structure Image for 8WUT

SpCas9-MMLV RT-pegRNA-target DNA complex (initiation)[RNA BINDING PROTEIN]

Taxonomy:: Streptococcus pyogenes serotype M1, Moloney murine leukemia virus, Streptococcus pyogenes

Proteins:: 2
Nucleic acids:: (3 DNA, 1 RNA)
modified:: 2024-09-11

MMDB ID:: 247962
PDB ID:: 8WUT

View in iCn3D Similar Structures PubMed Proteins

Select item 24796113.

Molecular Structure Image for 8WUS

SpCas9-MMLV RT-pegRNA-target DNA complex (termination)[RNA BINDING PROTEIN/RNA/DNA]

Taxonomy:: Moloney murine leukemia virus, Streptococcus pyogenes serotype M1, Streptococcus pyogenes

Proteins:: 2
Nucleic acids:: (3 DNA, 1 RNA)
modified:: 2024-09-11

MMDB ID:: 247961
PDB ID:: 8WUS

View in iCn3D Similar Structures PubMed Proteins

Select item 24615514.

Molecular Structure Image for 8SPQ

SpRY-Cas9:gRNA complex targeting TGG PAM DNA[IMMUNE SYSTEM]

Taxonomy:: Streptococcus pyogenes serotype M1, Streptococcus pyogenes, Escherichia phage Lambda

Proteins:: 1
Nucleic acids:: (3 DNA, 1 RNA)
Chemicals:: 4
modified:: 2024-05-23

MMDB ID:: 246155
PDB ID:: 8SPQ

View in iCn3D Similar Structures PubMed Proteins PubChem Compound

Select item 24532215.

Molecular Structure Image for 4OXD

Structure of the LdcB LD-carboxypeptidase reveals the molecular basis of peptidoglycan recognition[HYDROLASE]

Taxonomy:: Streptococcus pneumoniae R6, Lactobacillus acidophilus

Proteins:: 2
Chemicals:: 6
modified:: 2024-10-16

MMDB ID:: 245322
PDB ID:: 4OXD

View in iCn3D Similar Structures PubMed Proteins Conserved Domains PubChem Compound

Select item 24337616.

Molecular Structure Image for 8UUA

Cryo-EM structure of the Listeria innocua 50S ribosomal subunit in complex with HflXr (structure III)[RIBOSOME]

Taxonomy:: Listeria monocytogenes EGD-e, Listeria innocua

Proteins:: 28
Nucleic acids:: (RNA)
Chemicals:: 205
modified:: 2024-05-13

MMDB ID:: 243376
PDB ID:: 8UUA

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Select item 24337517.

Molecular Structure Image for 8UU9

Cryo-EM structure of the ratcheted Listeria innocua 70S ribosome (head-swiveled) in complex with HflXr and pe/E-tRNA (structure II-D)[RIBOSOME]

Taxonomy:: Listeria innocua, Escherichia coli, Escherichia phage T4, Listeria monocytogenes EGD-e

Proteins:: 47
Nucleic acids:: (RNA)
Chemicals:: 480
modified:: 2024-05-13

MMDB ID:: 243375
PDB ID:: 8UU9

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Select item 24337418.

Molecular Structure Image for 8UU8

Cryo-EM structure of the Listeria innocua 70S ribosome (head-swiveled) in complex with HflXr and pe/E-tRNA (structure II-C)[RIBOSOME]

Taxonomy:: Listeria innocua, Escherichia coli, Escherichia phage T4, Listeria monocytogenes EGD-e

Proteins:: 49
Nucleic acids:: (RNA)
Chemicals:: 428
modified:: 2024-05-13

MMDB ID:: 243374
PDB ID:: 8UU8

View in iCn3D Similar Structures PubMed Proteins PubChem Compound

Select item 24337319.

Molecular Structure Image for 8UU7

Cryo-EM structure of the Listeria innocua 70S ribosome in complex with HflXr, HPF, and E-site tRNA (structure II-B)[RIBOSOME]

Taxonomy:: Listeria innocua, Escherichia coli, Listeria monocytogenes EGD-e

Proteins:: 48
Nucleic acids:: (RNA)
Chemicals:: 397
modified:: 2024-05-13

MMDB ID:: 243373
PDB ID:: 8UU7

View in iCn3D Similar Structures PubMed Proteins PubChem Compound

Select item 24330220.

Molecular Structure Image for 8JG9

Cryo-EM structure of the SaCas9-sgRNA-AcrIIA15-promoter DNA dimer[VIRAL PROTEIN]

Taxonomy:: Staphylococcus aureus, Staphylococcus delphini

Proteins:: 4
Nucleic acids:: (2 DNA, 2 RNA)
modified:: 2024-09-11

MMDB ID:: 243302
PDB ID:: 8JG9

View in iCn3D Similar Structures PubMed Proteins

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Protein Domain Families

Families (11,224)
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Protein-Protein (8,400)
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Protein-DNA (894)
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