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Series GSE269443 Query DataSets for GSE269443
Status Public on Sep 01, 2024
Title Extracellular vesicles are involved in the paracrine communication between epithelial cells in different regions of the domestic cat epididymis
Organism Felis catus
Experiment type Expression profiling by high throughput sequencing
Summary Sperm maturation depends on exposure to specific microenvironments within the different segments of the epididymis, but mechanisms underlying how these microenvironments are produced or maintained are not well understood. We hypothesize that epididymal extracellular vesicles (EVs) could play a role in this process, and therefore set out to test whether the EVs from different regions of the epididymis can serve as a form of paracrine communication between epithelial cells. Domestic cat tissues were used to develop a reproducible in vitro culture system for corpus epididymis explants that were then exposed to EVs collected from upstream (i.e., caput) segments. The impacts of different culture or exposure conditions were compared by analyzing the morphology, apoptosis, transcriptional activity, and gene expression in the explants. Here, we report the development of the first in vitro culture system for epididymal tissue explants in the domestic cat model. Using this system, we found that EVs from the caput segment have a significant effect on the transcriptional profile of tissue from the corpus segment (1,233 differentially expressed genes due to EV supplementation). Of note, expression of genes associated with regulation of epithelial cell differentiation and cytokine signaling in the epididymis were regulated by the presence of EVs. Together, our findings comprise the first report of paracrine control of segmental gene regulation by epididymal EVs in any species. These results contribute to a better understanding of epididymis biology and could lead to techniques to enhance or suppress male fertility.
 
Overall design To determine the effect of caput EVs on the transcriptome of corpus epididymis explants, we cultured corpus explants with and without EV supplementation and also included fresh tissue controls. RNA was extracted, and sequenced.
 
Contributor(s) Sosnicki DM, Travis AJ, Comizzoli P
Citation(s) 39190878
Submission date Jun 09, 2024
Last update date Dec 02, 2024
Contact name Danielle Sosnicki
Organization name Smithsonian's National Zoo and Conservation Biology Institute
Street address 3001 Connecticut Ave NW
City Washington
State/province DC
ZIP/Postal code 20008
Country USA
 
Platforms (1)
GPL28702 Illumina NovaSeq 6000 (Felis catus)
Samples (15)
GSM8315879 corpus, fresh tissue, rep1
GSM8315880 corpus, culture, rep1
GSM8315881 corpus, culture+EVs, rep1
Relations
BioProject PRJNA1121928

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Supplementary file Size Download File type/resource
GSE269443_explants_rawcounts.txt.gz 637.8 Kb (ftp)(http) TXT
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Raw data are available in SRA

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