NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM665052 Query DataSets for GSM665052
Status Public on Oct 21, 2011
Title BT549 miR-181a Rep1
Sample type RNA
 
Channel 1
Source name BT549 miR-181a Overexpression Rep1
Organism Homo sapiens
Characteristics cell line: BT549
overexpression: miR-181a
Extracted molecule total RNA
Extraction protocol According to the manufacturer's protocol
Label Cy5
Label protocol According to the manufacturer's protocol
 
Channel 2
Source name BT549 miR-181a Control Overexpression Rep1
Organism Homo sapiens
Characteristics cell line: BT549
overexpression: control scrambled small RNA
Extracted molecule total RNA
Extraction protocol According to the manufacturer's protocol
Label Cy3
Label protocol According to the manufacturer's protocol
 
 
Hybridization protocol According to the manufacturer's protocol
Scan protocol Scanned on Agilent Technologies Scanner G2505B Images were quantified using Agilent Feature Extraction Software
Data processing LOWESS normalized, background subtracted VALUE data obtained from log2 of processed Red signal/processed Green signal. Agilent software was used.
 
Submission date Feb 01, 2011
Last update date Oct 21, 2011
Contact name Christopher Maher
E-mail(s) chrmaher@med.umich.edu
Phone 734-764-3336
Organization name Michigan Center for Translational Pathology
Street address 1500 E. Medical Center Drive
City Ann Arbor
State/province MI
ZIP/Postal code 48105
Country USA
 
Platform ID GPL4133
Series (1)
GSE26996 Coordinated regulation of polycomb group complexes through microRNAs in cancer

Data table header descriptions
ID_REF
VALUE -INV_VALUE: LOWESS normalized, background subtracted VALUE data obtained from log2 of processed Green signal/processed Red signal (test/reference)
INV_VALUE LOWESS normalized, background subtracted VALUE data obtained from log2 of processed Red signal/processed Green signal

Data table
ID_REF VALUE INV_VALUE
12 0.712038 -0.712037914
13 0.984327 -0.98432686
14 0.162566 -0.162566431
15 -0.267798 0.267798408
16 0 0
17 -0.2609 0.260900239
18 0.770748 -0.770748235
19 -0.739817 0.739816558
20 0 0
21 0.0704496 -0.07044958
22 -0.218993 0.218992651
23 -1.32413 1.324127021
24 0.492785 -0.492784767
26 -0.586533 0.586533249
27 0.262684 -0.262683738
28 0 0
29 1.13257 -1.132565861
30 -0.105653 0.105652799
31 1.94846 -1.948455354
32 0.210275 -0.210274685

Total number of rows: 41000

Table truncated, full table size 937 Kbytes.




Supplementary file Size Download File type/resource
GSM665052_miR181a_1.txt.gz 14.0 Mb (ftp)(http) TXT
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap