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Sample GSM996597 Query DataSets for GSM996597
Status Public on Oct 28, 2012
Title H229
Sample type RNA
 
Source name Whole blood
Organism Homo sapiens
Characteristics tissue: whole blood
group: Healthy
Extracted molecule total RNA
Extraction protocol RNA was isolated using the MagMAX™-96 Blood RNA Isolation Kit (Applied Biosystems) according to the manufacturer's instructions
Label biotin
Label protocol Biotynlated cRNA were generated following manufacturer protocols using the Illumina TotalPrep RNA Amplification Kit from Ambion.
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Illumina BeadArray Reader
Data processing The data were analysed using BeadStudio version using the average chip normalization method.
 
Submission date Sep 03, 2012
Last update date Oct 28, 2012
Contact name Zhaohui Xu
Organization name St. Jude Children's Research Hospital
Department Infectious Diseases
Street address 262 Danny Thomas Place
City Memphis
State/province TN
ZIP/Postal code 38105
Country USA
 
Platform ID GPL6947
Series (2)
GSE40561 Transcriptional analysis of whole blood in patients with auto-inflammatory disorders
GSE40752 Transcriptional analysis of whole blood, primary fibroblasts, and PBMCs upon TNF-alpha or IL-1beta stimulation from HOIL-1-deficient patients

Data table header descriptions
ID_REF
VALUE Average normalized
Detection Pval

Data table
ID_REF VALUE Detection Pval
ILMN_1762337 -8.882279 0.8682477
ILMN_2055271 15.74322 0.04347826
ILMN_1736007 2.656702 0.3227932
ILMN_2383229 -7.976785 0.8313571
ILMN_1806310 -7.481847 0.8063241
ILMN_1779670 1.267465 0.3860343
ILMN_1653355 13.74362 0.06324111
ILMN_1717783 0.1990635 0.4255599
ILMN_1705025 5.015929 0.2358366
ILMN_1814316 -3.222985 0.5981554
ILMN_2359168 -2.702929 0.5704875
ILMN_1731507 -11.5277 0.942029
ILMN_1787689 6.199194 0.198946
ILMN_1745607 -7.177186 0.7931489
ILMN_2136495 -8.303375 0.8418972
ILMN_1668111 4.000825 0.2753623
ILMN_2295559 -1.602773 0.5098814
ILMN_1735045 -4.532621 0.6613966
ILMN_1680754 3.708524 0.284585
ILMN_2375184 2.537915 0.3293808

Total number of rows: 48803

Table truncated, full table size 1484 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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