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Sample GSM996626 Query DataSets for GSM996626
Status Public on Oct 28, 2012
Title MWS57
Sample type RNA
 
Source name Whole blood
Organism Homo sapiens
Characteristics tissue: whole blood
group: MWS
Extracted molecule total RNA
Extraction protocol RNA was isolated using the MagMAX™-96 Blood RNA Isolation Kit (Applied Biosystems) according to the manufacturer's instructions
Label biotin
Label protocol Biotynlated cRNA were generated following manufacturer protocols using the Illumina TotalPrep RNA Amplification Kit from Ambion.
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Illumina BeadArray Reader
Data processing The data were analysed using BeadStudio version using the average chip normalization method.
 
Submission date Sep 03, 2012
Last update date Oct 28, 2012
Contact name Zhaohui Xu
Organization name St. Jude Children's Research Hospital
Department Infectious Diseases
Street address 262 Danny Thomas Place
City Memphis
State/province TN
ZIP/Postal code 38105
Country USA
 
Platform ID GPL6947
Series (2)
GSE40561 Transcriptional analysis of whole blood in patients with auto-inflammatory disorders
GSE40752 Transcriptional analysis of whole blood, primary fibroblasts, and PBMCs upon TNF-alpha or IL-1beta stimulation from HOIL-1-deficient patients

Data table header descriptions
ID_REF
VALUE Average normalized
Detection Pval

Data table
ID_REF VALUE Detection Pval
ILMN_1762337 -4.086751 0.6613966
ILMN_2055271 6.085005 0.1541502
ILMN_1736007 0.0206222 0.4176548
ILMN_2383229 0.1127938 0.4110672
ILMN_1806310 -0.8116675 0.4624506
ILMN_1779670 -7.4761 0.8801054
ILMN_1653355 12.59671 0.06587616
ILMN_1717783 -0.4726921 0.4466403
ILMN_1705025 -1.920417 0.5256917
ILMN_1814316 0.04891537 0.4176548
ILMN_2359168 1.114597 0.3583663
ILMN_1731507 -9.51936 0.9486166
ILMN_1787689 -1.154426 0.4808959
ILMN_1745607 -7.670307 0.8814229
ILMN_2136495 -7.747082 0.8880106
ILMN_1668111 -4.324425 0.6772069
ILMN_2295559 0.1721964 0.4057971
ILMN_1735045 -3.818075 0.6508564
ILMN_1680754 -2.393843 0.5559947
ILMN_2375184 -0.2234722 0.4374177

Total number of rows: 48803

Table truncated, full table size 1478 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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