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Series GSE58316 Query DataSets for GSE58316
Status Public on Jan 01, 2015
Title Suppression of NCALD protects against spinal muscular atrophy by restoring impaired endocytosis
Organism Homo sapiens
Experiment type Expression profiling by array
Summary Spinal muscular atrophy (SMA) is a common genetic motor neuron (MN) disease caused by low levels of the ubiquitously expressed housekeeping survival motor neuron (SMN) protein, whereas concomitant overexpression of plastin 3 (PLS3) protects from SMA. Here we identify neurocalcin delta (NCALD), a neuronal calcium sensor, as a second fully protective SMA modifier, which counteracts SMA pathology when downregulated. We show reduced Ca2+ influx and impaired endocytosis in SMA, which are crucial processes in synaptic vesicle recycling and neurotransmission. Remarkably, both reduced NCALD or increased PLS3 restore endocytosis in cell culture and MN function across species in zebrafish, worm and mouse SMA models, whereas Ca2+ influx remains disturbed. Furthermore, NCALD physically binds clathrin in a Ca2+-dependent manner. We propose that NCALD acts as a Ca2+-regulated inhibitor of endocytosis, and that endocytosis is critically affected in SMA. This finding opens new therapeutic avenues for SMA.
 
Overall design Multifactorial design comparing affected patients and unaffected disease carriers against severly affected control group to identify disease modifying transcripts
 
Contributor(s) Riessland M, Swoboda KJ, Löhr H, Bradler C, Dimitriadi M, Kaczmarek A, Schneider S, Mohsen S, Barkooie H, Peters M, Bigliari N, Grysko V, Kröber S, Hölker I, Garbes L, Gilissen C, Hoischen A, Nürnberg G, Nürnberg P, Walter M, Kye MJ, Hart A, Hammerschmidt M, Kloppenburg P, Wirth B
Citation(s) 28132687
Submission date Jun 09, 2014
Last update date Jul 10, 2019
Contact name Michael H. Walter
E-mail(s) michael.walter@agilent.com
Organization name University of Tuebingen
Department Department of Medical Genetics
Lab The Microarray Facility Tübingen
Street address Calwer Str. 7
City Tuebingen
ZIP/Postal code 72076
Country Germany
 
Platforms (1)
GPL6947 Illumina HumanHT-12 V3.0 expression beadchip
Samples (12)
GSM1406388 LBL_unaffected_rep1
GSM1406389 LBL_unaffected_rep2
GSM1406390 LBL_unaffected_rep3
Relations
BioProject PRJNA251983

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE58316_RAW.tar 6.2 Mb (http)(custom) TAR
GSE58316_non-normalized.txt.gz 3.9 Mb (ftp)(http) TXT
Processed data included within Sample table

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